FMO06730.5prime Sequence
911 bp (871 high quality bases) assembled on 2008-10-01
> FMO06730.5prime
CAGTCGACATGATCCAGCTGCTCCAGTTGCTTCTATGTACTATTCCACTC
GTTGTGGGCGAGGTTCTGCCCCTGCAACTCGATTTGGACAACAGTCAAAT
TACCATACGGCGAAGTGCCAGTCGCGATGACAAATTGCAGGTATTCCACA
GCATCTGGGGCGCCATTCGCTCCGACTTCGCCACCGATACGGACAAGGTG
AAGGGCCTGTACAGTCAGCTGGGCGGATATATTCGCGACGATGTGCAGTG
CAGTAGCGGCTCCACGGGTCGATCTGCCTGCGAGCTGCAGCAGGAGGTGC
GACGCCACCTGCGGACCCTCATGGCCCAGCGGCTGGCCAATCTGTTGAAC
GCCGAGGAGAGCATTCAGACATACGGTATGTACATAGCGGCCAGTGTGGA
GCCCGCCCTGGTCAGGGACATTCTGGTGCACGCCATCGAGGACGTGTACT
TCCATCGACCGCTGGAGAAGCTGGTGCAGCAGCTGGAGCAACTGTACGCG
GATCGCGACGAGGTCAGCTTTCGCACGATGATCGAGGCGCAATTGGCGCT
CTTCTGGCGCTATCAGGCCATGCAGGACAGCAGCGAGGCGTACCTGTTCA
ACGTCGCGCACATGGTCAGCAAGATCCGGAGCCATCACATGTATGCCAGC
GTCGATGCGGATCTCTAGAAGCGAGTGGAGGCATTGAGCCAACGTCTGCC
GCCCGTTCTAGACTTGCTCTTCGATCCGCAGGGATTCTGCCTGCTGAGTC
GCTCCGATCGCGAGTACATCTACACGACCATAACGGACGAGTGGAACTAC
GGTCTGAATGGGCGGCAGATGTTCTCCTGCGCGAGAGAACTTCACGATAC
CGCGGGCCTGACACGCGCCTTCTTCAGAGCAGACTCCACGCCGCTCTTCA
CGCTGCGTAGC
FMO06730.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:39:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42512-RA | 1782 | CG42512-RA | 496..1404 | 9..911 | 4335 | 98.9 | Plus |
| CG32573-RC | 1332 | CG32573-RC | 46..954 | 9..911 | 4335 | 98.9 | Plus |
| CG32573-RA | 1782 | CG32573-RA | 496..1404 | 9..911 | 4335 | 98.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:39:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 16652079..16652897 | 99..911 | 3755 | 98.7 | Plus |
| X | 23542271 | X | 16651927..16652016 | 9..98 | 450 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:39:44 has no hits.
FMO06730.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:34:18 Download gff for
FMO06730.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32573-RA | 489..1404 | 1..911 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-01 13:28:37 Download gff for
FMO06730.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32573-RA | 489..1404 | 1..911 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:24:44 Download gff for
FMO06730.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32573-RA | 489..1404 | 1..911 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:24:44 Download gff for
FMO06730.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 16651920..16652016 | 1..98 | 96 | -> | Plus |
| X | 16652079..16652897 | 99..911 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:34:18 Download gff for
FMO06730.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 16545953..16546049 | 1..98 | 96 | -> | Plus |
| arm_X | 16546112..16546930 | 99..911 | 98 | | Plus |
