FMO06731.5prime Sequence
628 bp (-82 high quality bases) assembled on 2008-10-01
> FMO06731.5prime
CCTTATCAGTCGACATGGCAAGTCACAGCTTTTTGTGTTTACAGGAGAAC
GAGTACTTCCAGGATCTATTGCACACCAACCAGCGGCGTCTGCTGAAAGT
TTCCCGGGATCGTACCTTCCTGCTGGACCGTCTGCTGGTGTACGAGAAGC
CGGCCAAGGACTCTAGCGACTCGGATGCCACCGACAGCTCCGATTCGGAG
CCAGCTTCTACGTCCGGCGTTGCCGGCGGATCGCAAACATCCAAGGACGC
CATTCGGCGCAAGCACAAAGACAAGGGGGCACCAGGAATTCCAGGTGTGC
CTCCGCACATGCCCACAGTGGGCGCCCCACGAGGTCGAAGACGAAAAATC
CTAACCGGAATGTTGCCCGCGAACCATGGAATCCCAGCAATTGCTGCGAA
AAAACAACTTACCGCCACGGTGTCACCTTCGCAGCAGCCACCGCAACTAC
AGACTGCTCCGAAGGATGTGTCGCCCGGCCTCAGCCAAGCGGAGATTGCC
CGCCAGCTGCAGGAGCGACAACCGACGCCGTTGGAGCTATTGAGTCCGGA
ATGCACTTCGGCCACCGTGCCCCACAACGATGCTCAGCGATGAAAGCCCC
TCTAAGTGGGCAAGCTTTTCTAGACCAT
FMO06731.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:09:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18004-RA | 1044 | CG18004-RA | 317..879 | 45..608 | 2780 | 99.6 | Plus |
| CG18004-RB | 1168 | CG18004-RB | 441..1003 | 45..608 | 2780 | 99.6 | Plus |
| CG18004-RD | 1026 | CG18004-RD | 317..861 | 63..608 | 2690 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:09:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 10885560..10886153 | 15..609 | 2910 | 99.7 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:09:58 has no hits.
FMO06731.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:25:14 Download gff for
FMO06731.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18004-RB | 441..1003 | 45..608 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-01 13:28:34 Download gff for
FMO06731.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18004-RC | 237..833 | 15..613 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:01:35 Download gff for
FMO06731.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18004-RB | 441..1003 | 45..608 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:01:35 Download gff for
FMO06731.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 10885560..10886156 | 15..613 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:25:14 Download gff for
FMO06731.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 6773065..6773661 | 15..613 | 99 | | Plus |
