FMO06735.5prime Sequence
633 bp (633 high quality bases) assembled on 2008-10-01
> FMO06735.5prime
GAGATCGGGACCGAGAAAGAGACAGAGAGCGAGACCGCGACAGACGACAC
AGATCAAAGTCGCCCAGCAGGAGCAGCCGGCAGGTTTCTAAACCGAAGAA
GAAAAAGGCCAAGAAGTCGAAAAAGTACTCGAGAAGGAGTCGCAGTAGCA
GTCGCAGCACCTCGCGCAGCTCCTCCAGCAGCAGGAGTAGTTCCCGCAGC
ACGCACAGCAAAAGCAGAACCAGGGATCATCACAAATCGCGGTCTATTTC
GCAGAGGAAAACCAGGGGTCCAAGTTCGGAAAGCAATTCCCGATCCGCAA
CCACACCCGCAGCTGCTCCCGTGAAGGCCATCGATCTGTTCGACACCAAG
GTGCAAAAGGCACTCGAGACTATAGACGAGGACACCTTCAAGCCGGAGTC
ATTTTTTAGCTCCAGGGATTCAAAGGAGACATCCGATAAGGTGATCATAG
ATCTGAACAATGAAACGGTCACAGTCGCCAGCAAGCCAGCCACTGCAGTC
CGAAACGAAAGATGTAATATTCCATCCGAACTTCCTGGGCGACCCGGATA
TGAAGGCCGAGAAGTGGCTGCGCAAGCTGTACAATTACCGCCAAAAAGTA
CTTGCAGGAGGCAAAGCTTTCTAGACCATTCGT
FMO06735.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:20:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11808-RA | 801 | CG11808-RA | 143..750 | 1..610 | 2970 | 99.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:19:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 15216349..15216878 | 1..531 | 2590 | 99.6 | Plus |
| 2R | 25286936 | 2R | 15216942..15217019 | 532..610 | 330 | 97.5 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:19:59 has no hits.
FMO06735.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:00:35 Download gff for
FMO06735.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11808-RA | 143..750 | 1..610 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-01 13:31:53 Download gff for
FMO06735.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11808-RA | 141..748 | 1..610 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:11:29 Download gff for
FMO06735.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11808-RA | 143..750 | 1..610 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:11:29 Download gff for
FMO06735.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 15216349..15216878 | 1..531 | 99 | -> | Plus |
| 2R | 15216942..15217006 | 532..597 | 98 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:00:35 Download gff for
FMO06735.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 11103854..11104383 | 1..531 | 99 | -> | Plus |
| arm_2R | 11104447..11104511 | 532..597 | 98 | -> | Plus |
