FMO06737.5prime Sequence
601 bp (601 high quality bases) assembled on 2008-10-01
> FMO06737.5prime
AAGGTTATCAGTCGACATGCTGACGAAGGCGCTTATCCTGTTCGGCCTGC
TGGCCTTGGCCCAAGGTTACAGCTTCACCTCCCGCGAGGTCAAGTGTCAC
GTGTGCAAGGCCGTGGTTACGGAACTGGAGGAGGCCATTGCCAAGGAGGA
CCCCCACAAGATGGCCGATGTCAGTGGATTCCGGCTGGACGCACAGGGAA
ATTCGATCAGCAAGAAAGTTCGCCTAGTGAAATCTGAAATGTTCCTTACC
GAACTGATGGAGAAGATCTGCGAAAAAATGGACGACTACTTGAAGGCAAC
CTACAAGAGCAACGGGAAATTCACACTCCTCAAGATGATCATCAATGGTC
AGATGAACCCAGACTCCTCGTTGGTTGACTTTGTGCAAGATGGTGATCTC
AACAAAAGCCTGGGGCACTTCTGCAACGAAGTACTGGAGGACAACGATGA
GATCTTCGTTAAAGCCTTCCAGGCCGAAGAGCTCGGAAACGATTTAGACA
TCAAGATCTGCTCAGAACAAGCGAGCTACTGCGACGAATCGCCGGTCCAG
GAGGAGTATGACTTTGATGGCAAAGAGGAACTGGCAAGCTTTCTAGACCA
T
FMO06737.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:25:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| sel-RA | 1012 | CG12918-RA | 282..848 | 17..583 | 2835 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:25:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 10051026..10051339 | 583..270 | 1570 | 100 | Minus |
| 2R | 25286936 | 2R | 10051533..10051702 | 270..101 | 850 | 100 | Minus |
| 2R | 25286936 | 2R | 10051802..10051886 | 101..17 | 425 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:25:29 has no hits.
FMO06737.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:00:44 Download gff for
FMO06737.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| sel-RA | 282..854 | 17..592 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-01 13:28:32 Download gff for
FMO06737.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12918-RA | 247..819 | 17..592 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:01:10 Download gff for
FMO06737.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| sel-RA | 282..854 | 17..592 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:01:10 Download gff for
FMO06737.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 10051020..10051339 | 270..592 | 98 | <- | Minus |
| 2R | 10051534..10051701 | 102..269 | 100 | <- | Minus |
| 2R | 10051802..10051886 | 17..101 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:00:44 Download gff for
FMO06737.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 5938525..5938844 | 270..592 | 98 | <- | Minus |
| arm_2R | 5939039..5939206 | 102..269 | 100 | <- | Minus |
| arm_2R | 5939307..5939391 | 17..101 | 100 | | Minus |
