FMO06741.5prime Sequence
716 bp (716 high quality bases) assembled on 2008-10-01
> FMO06741.5prime
CAGTCGACATGAAATCCTGGTACCTAGCACTCAGCCTGCTGCTCCTCGCC
GCATCCACAATTCAGCCCACTGACGCTCGTGGCGGAAGGGGGCGTGGCGG
CGGCTCATTTGGCGGACTCTTTGGCGGTTGGCGCAAGTACAAGAAGCCCT
CGTCGTCGGGCGGTGGTCGGCGGGTGGTGAGCGGTTCGCCAGTTCACACG
GCCATGACGGTGCCGAAACCACCACCGCCTCCGCCGGCACCACCAAAGAT
GCCCATGATGCCGCCCAAGCAGCAAATCCCCAGCTATCCTCGCCAGCAGA
TGCCACCTGGCTATGGCTTTGGATCGTATCCGGGCCAAGGCAGTGGAACG
TACTACGCCAATGCCCAGGCCCTGCCAGCGGGAGCGGTTTACTATGCCCA
ACCACCCGTCGGAATGAATCGAGGAATCGGTACAGGAGATTTCCTCACCG
GAATGCTGGCGGGTCACATGATGAACAACGTTCTGTTTGGCCACCGACAC
CATACGTACCATAGAAATCCGGAGGAGGGCCAGTCGTCGCCCCAGGGAAA
TGGTCGACAGATCATCATCGTCAACAATGGTCAGCAGGAGGGAGTTTTGC
ACAATGAGACCACTATTTCAGGAGAATCCTCCGCAGTGGTCCCCCCGGAA
AATCCCCTAACGGAGGAGGATGACGTAGAGGGGCAGGGCGAAAGTGACGG
AGGAAGTGAAGCTGTT
FMO06741.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:07:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31706-RB | 1625 | CG31706-RB | 59..766 | 9..716 | 3525 | 99.9 | Plus |
| CG31706-RA | 1139 | CG31706-RA | 59..766 | 9..716 | 3525 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:07:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 11530572..11530994 | 431..9 | 2115 | 100 | Minus |
| 2L | 23513712 | 2L | 11529897..11530184 | 716..429 | 1425 | 99.7 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:07:06 has no hits.
FMO06741.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:16:49 Download gff for
FMO06741.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31706-RA | 51..766 | 1..716 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-01 13:28:26 Download gff for
FMO06741.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31706-RA | 48..763 | 1..716 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:50:32 Download gff for
FMO06741.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31706-RA | 51..766 | 1..716 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:50:32 Download gff for
FMO06741.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 11529897..11530183 | 430..716 | 99 | <- | Minus |
| 2L | 11530574..11531002 | 1..429 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:16:49 Download gff for
FMO06741.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 11529897..11530183 | 430..716 | 99 | <- | Minus |
| arm_2L | 11530574..11531002 | 1..429 | 99 | | Minus |
