FMO06746.5prime Sequence
629 bp (629 high quality bases) assembled on 2008-10-01
> FMO06746.5prime
CGTTATCAGTCGACATGTCTTATGGACAAGGCTATAACCCGTATGCCCAG
CCCGGTGGTGGCTATGCCCCGCCGCCAGGAGCATTTCCGCCGCAGAATGC
CCAGGTGTCTCCGCAGGCACAGCAATGGTTCTCCATGGTGGACCGCGACC
GATCTGGAAAGATAAACGCTTCCGAGTTGCAGGCGGCCCTGGTGAATGGG
CGTGGCGATCACTTCTCGGATAATGCCTGCAAGCTGATGATAAGCATGTT
CGACAACGACGCCAGTGGTACCATCGATATCTATGAGTTCGAGAAGCTCT
ACAACTACATCAACCAATGGCTGCAAGTCTTCAAGACCTACGATCAGGAC
TCCTCTGGACATATCGAGGAACAGGAGCTGACCCAAGCCTTCACCCAGAT
GGGCTTTCGATTCTCGCCCGAATTCATAAACTTCCTGGTGAAGAAGAGCG
ACCCCCAGGGCCACAAAGAGGTGTCCGTGGATCAGTTCATAGTGCTCTGC
GTGCAGGTGCAGCGTTTCACGGAGGCCTTCAGGCAGCGCGACACCCAGCA
GAATGGAACCATCACCATTGGGTTCGAGGACTTCCTCACCGTGGCCATTG
GCTGCTCGTATGCAAGCTTTCTAGACCAT
FMO06746.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:36:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17765-RA | 989 | CG17765-RA | 93..689 | 15..611 | 2985 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:36:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 10481361..10481586 | 386..611 | 1130 | 100 | Plus |
| 2R | 25286936 | 2R | 10480323..10480543 | 24..244 | 1105 | 100 | Plus |
| 2R | 25286936 | 2R | 10481090..10481169 | 244..323 | 400 | 100 | Plus |
| 2R | 25286936 | 2R | 10481226..10481290 | 323..387 | 325 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:36:51 has no hits.
FMO06746.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:33:16 Download gff for
FMO06746.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17765-RA | 93..695 | 15..616 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-01 13:31:49 Download gff for
FMO06746.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17765-RA | 96..698 | 15..616 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:35:38 Download gff for
FMO06746.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17765-RA | 93..695 | 15..616 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:35:38 Download gff for
FMO06746.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 10480323..10480542 | 24..243 | 100 | -> | Plus |
| 2R | 10481090..10481169 | 244..323 | 100 | -> | Plus |
| 2R | 10481227..10481290 | 324..387 | 100 | -> | Plus |
| 2R | 10481363..10481592 | 388..616 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:33:16 Download gff for
FMO06746.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 6368732..6368795 | 324..387 | 100 | -> | Plus |
| arm_2R | 6367828..6368047 | 24..243 | 100 | -> | Plus |
| arm_2R | 6368595..6368674 | 244..323 | 100 | -> | Plus |
| arm_2R | 6368868..6369097 | 388..616 | 99 | | Plus |
