FMO06749.5prime Sequence
578 bp (578 high quality bases) assembled on 2008-10-01
> FMO06749.5prime
TCAATGTTATCTTTATTGTCCTGGAAGTGGGCGTGGCCTCCGTTACAAAA
GAAAACCGCGAAGTGAGGAACTTCAAGGTGGGCGATCCTACGGCCTGCAT
CAATGTTTCGATTTGGGACGAGCCGGGCAAACTGATAGCACCCGGTGATA
TTGTCAGACTGACAAAGGGCTACGCCTCCATCTGGAGGCATTGTCTGACC
CTTTATTCCGGAAAGAACGGCGAGGTGTTCAAGATCGGCGAGTACTGCAT
GGTCTTCAACGAGAGCGTCAATATGAGTGAACCGAAACGGGCGGAGCAGC
AGGCGGTGGCAAATCCTGCTGCTACTCCGGCGGGACTTCCGGCCGGTGGT
GGTGCTCCTGGCTTGCCCGCTAAGGGTGGTGCCACGGGCATTCCACAGCC
CGCGGTGGCTGCTGCACCAGGTGCTCCCGCCACCCAGAGCGCCGTGACCA
CTGCTCCTGCTGCGGCGCCAGCAATCGCACCCCAAACGACAACGAAACCT
GGCACCCGTGGCGGCCGTGGAGGTGGAGGACGAGGTGGCCTTAACGGGGA
ACGGCGTGCAAGCTTTCTAGACCATTCT
FMO06749.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:40:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5181-RA | 1214 | CG5181-RA | 161..717 | 1..557 | 2740 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:40:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 7409030..7409512 | 557..75 | 2385 | 99.6 | Minus |
| 2L | 23513712 | 2L | 7409568..7409649 | 82..1 | 395 | 98.8 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:40:50 has no hits.
FMO06749.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:53:40 Download gff for
FMO06749.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5181-RA | 161..720 | 1..561 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-01 13:28:12 Download gff for
FMO06749.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5181-RA | 131..690 | 1..561 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:15:37 Download gff for
FMO06749.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5181-RA | 161..720 | 1..561 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:15:37 Download gff for
FMO06749.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 7409024..7409509 | 78..562 | 98 | <- | Minus |
| 2L | 7409573..7409649 | 1..77 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:53:40 Download gff for
FMO06749.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 7409024..7409509 | 78..562 | 98 | <- | Minus |
| arm_2L | 7409573..7409649 | 1..77 | 98 | | Minus |
