FMO06752.5prime Sequence
674 bp (674 high quality bases) assembled on 2008-10-01
> FMO06752.5prime
CAGTCGACATGCCCGTGGTGAACGTGTCGGCTGCCGAGGAGTACCAGAAG
TACATTAATGCGGATAAGACGACCGTAGCTCTATTCGCCGCCGAATGGGC
AGAGCAATGCGGTCAGGTGAAAGACGCGCTGGAGGAGCTGGCCAAGATTA
CTGGCGAAAAACTGCAGTTCATCAGCCTAAACGCTGAACAATTTCCCGAG
ATTTCCATGAAACATCAGATCGAGGCCGTGCCCACAGTCATATTCTTCGC
CAAGGGCTCCGCCGTTGACCGTGTCGATGGTGTAGACATCGCCGCCATAA
GCGCCAAATCCAAAAAGTTGGCCGAAAACGCAAGCAGCGCGGCGGCAACA
GGACAAACGTTGGAGGAACGCCTAAAGGCCCTAATCAATACAGCTCCGCT
GATGATATTCATGAAGGGCGACCGAAATGGACCGCGTTGCGGATTCTCCA
AGCAGCTCATCGGCATTGTGAACGAAACCAACTTGCCGTACGAGACATTT
GACATCCTCGGCGACGAAGAAGTGCGTCAAGGCCTGAAAACCTACTCCGA
CTGGCCCACATATCCCCAGGTTTACGTCAAGGGTGAACTTATCGGCGGAC
TCGATATTATTAAGGAACTGCTGGCGAACAATGAGCTCGAGTCCACGCTA
AAGGGCGCAAGCTTTCTAGACCAT
FMO06752.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:40:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6523-RA | 837 | CG6523-RA | 84..732 | 8..656 | 3245 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:40:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 13366802..13367067 | 216..481 | 1330 | 100 | Plus |
| 2L | 23513712 | 2L | 13366530..13366740 | 8..218 | 1055 | 100 | Plus |
| 2L | 23513712 | 2L | 13367131..13367305 | 482..656 | 875 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:40:25 has no hits.
FMO06752.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:53:32 Download gff for
FMO06752.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6523-RA | 84..737 | 8..664 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-01 13:28:07 Download gff for
FMO06752.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6523-RA | 65..718 | 8..664 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:15:23 Download gff for
FMO06752.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6523-RA | 84..737 | 8..664 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:15:23 Download gff for
FMO06752.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 13366805..13367067 | 219..481 | 100 | -> | Plus |
| 2L | 13367131..13367310 | 482..664 | 97 | | Plus |
| 2L | 13366530..13366740 | 8..218 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:53:32 Download gff for
FMO06752.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 13366530..13366740 | 8..218 | 100 | -> | Plus |
| arm_2L | 13366805..13367067 | 219..481 | 100 | -> | Plus |
| arm_2L | 13367131..13367310 | 482..664 | 97 | | Plus |
