FMO06753.5prime Sequence
818 bp (818 high quality bases) assembled on 2008-10-01
> FMO06753.5prime
CAGTCGACATGTCGACTATAATTGAAACCGGCAAGTCAGATTTCATCAAG
GTGAATGTTTCCAACTCTCACAATGATGCAGTCGCCTTCGAGGTCAAGTT
AGCCAAGGATCTAACAGTTGCCCAGCTCAAGACCAAACTTGAGATACTGA
CGGGCGGATGTGCCGGTACCATGAAGGTGCAGGTCTTCAAGGGTGACACC
TGCGTGTCCACAATGGACAACAATGACGCCCAACTGGGTTACTATGCCAA
CAGTGATGGACTCCGGCTGCATGTCGTCGATAGCTTTGCTACCTTCTCGT
TCGACAGCGCTCCCGTTGAGAAATTCGAACTGTCCAAAGATCAGTACGAA
CAGCGAACAGATTCTGTGCGCAACTACCTCAAGATTAATCGCATGGGCAA
GTACAACGATGAGGAGATGCAACAGGCGGAGGAGAAGAAGCGCCTTCAGG
CGGAGGAGATCCAAAAACGGGCGGAACTTTGTGTACTGGGTGGCAGATGT
GAGGTTACGGTTCCAGGTAATCCAACACGACGAGGAACAATCCGATACAA
TGGTCCGCTCGAAGGGAAAAGTGGTCACTTTATTGGAGTGGAATACGACG
AACCACTGGGGAAAAATAATGGAAGTTTCGGTGGAAAGGCCTACTTTACG
TGTGCCCCAAATTACGGCGGCTTTGTATCACCATTATCCGTTACGGTTGG
TGACTTTCCGCCGGAAGACTTCACATGGATGACGAGCTCGCAAGCTTTCT
AGACCATTCGTTTGGCGCGCGGGCCCGGTAAGTGGTCATAATCATATCAT
AATCATAATTATAATCCC
FMO06753.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:56:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| TBCB-RA | 1166 | CG11242-RA | 123..854 | 9..739 | 3635 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:56:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 19486167..19486542 | 505..130 | 1880 | 100 | Minus |
| 2R | 25286936 | 2R | 19485983..19486106 | 625..502 | 620 | 100 | Minus |
| 2R | 25286936 | 2R | 19486593..19486715 | 131..9 | 615 | 100 | Minus |
| 2R | 25286936 | 2R | 19485806..19485922 | 739..624 | 535 | 99.1 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:56:38 has no hits.
FMO06753.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:19:48 Download gff for
FMO06753.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| TBCB-RA | 115..854 | 1..739 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-01 13:28:03 Download gff for
FMO06753.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11242-RA | 113..852 | 1..739 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:43:47 Download gff for
FMO06753.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| TBCB-RA | 115..854 | 1..739 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:43:47 Download gff for
FMO06753.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 19485806..19485920 | 626..739 | 99 | <- | Minus |
| 2R | 19485983..19486104 | 504..625 | 100 | <- | Minus |
| 2R | 19486169..19486540 | 132..503 | 100 | <- | Minus |
| 2R | 19486593..19486722 | 1..131 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:19:48 Download gff for
FMO06753.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 15373311..15373425 | 626..739 | 99 | <- | Minus |
| arm_2R | 15373488..15373609 | 504..625 | 100 | <- | Minus |
| arm_2R | 15373674..15374045 | 132..503 | 100 | <- | Minus |
| arm_2R | 15374098..15374227 | 1..131 | 96 | | Minus |
