FMO06754.5prime Sequence
887 bp (887 high quality bases) assembled on 2008-10-01
> FMO06754.5prime
CCTATACGAATTTATCAGTCGACATGGAGAAAAACAAATATGTACCACGT
GTAAATCAGATAGATGCCATCTATTTGAACAAGGACATTGCCCGCCTGAT
ACGCGATAATCTGCTGGAGAACTTGCAAGCCATCTCACCCGTTTTGTTCA
TCAAAATCCAACCGGAGCTCGACTTGATCATTCAATCCGCAATTTGGTTT
GGTTCCGTCGGCAAGCGGTGCTCCACTTTTGGCCAACAGCTACTGGTTCT
GGCTTACGATGCCGAAAAGCTGACCGTTTCCAGGCTGGTGCTCCATTTCA
TCCTGACCGTCTTGCCGGGCTACGTGAAGAGCTGGGAGGAGCGACGCTTA
ACAAGGCGCGTAGAATGGTTTAGCGAGGCGATTATGTGGGTGGAGAACAG
TGCCCTGATACTGAACATCCTCAATTACTTTCGGTTCCTGAAGACAGGAC
GAAAACCCACTTTGGTGGACTACTTATTGGGATTGGACTACATTAGTCTG
CGGAACAATCAAAGGAGAGACATTGGCTACAAGTACCTAACGAGGGAGCT
GCTGTGGGGAGGATTTATGGAAATCCTCGGACTGGTGTTGCCCATCATCA
ATTTCCGTAAGCTACAAAGAGTGCTAAAATCATGGACATTTTCCGGACGA
CGGTTAGAGGATAGAGATGGTCCGGCTTTCCTGGCGCCGCAGATGACACT
AAACACCACCTGCACATTCTGTGGAGAGCGACCCACATTGCCCCACCACA
TGGGCTGTGGTCATATTTATTGCTATTACTGCCTTAATGCAAATGTTTTA
ACGGATGCCAGTTTCTGCTGCCCCAACTGCGGTTCTGCGTGTCCTGAGTC
GGGAATCCAAGTGTCGCAAAGCTTTCTAGACCATTCG
FMO06754.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:08:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Pex2-RA | 1051 | CG7081-RA | 105..947 | 24..865 | 4175 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:08:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 8339390..8339822 | 138..570 | 2165 | 100 | Plus |
| 3L | 28110227 | 3L | 8339875..8340166 | 569..860 | 1445 | 99.7 | Plus |
| 3L | 28110227 | 3L | 8339255..8339334 | 58..137 | 400 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:08:02 has no hits.
FMO06754.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:24:35 Download gff for
FMO06754.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pex2-RA | 105..947 | 24..865 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-01 13:28:00 Download gff for
FMO06754.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7081-RA | 103..945 | 24..865 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:00:35 Download gff for
FMO06754.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pex2-RA | 105..947 | 24..865 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:00:35 Download gff for
FMO06754.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 8339155..8339190 | 24..59 | 100 | -> | Plus |
| 3L | 8339257..8339334 | 60..137 | 100 | -> | Plus |
| 3L | 8339390..8339821 | 138..569 | 100 | -> | Plus |
| 3L | 8339876..8340172 | 570..865 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:24:35 Download gff for
FMO06754.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 8332255..8332290 | 24..59 | 100 | -> | Plus |
| arm_3L | 8332357..8332434 | 60..137 | 100 | -> | Plus |
| arm_3L | 8332490..8332921 | 138..569 | 100 | -> | Plus |
| arm_3L | 8332976..8333272 | 570..865 | 99 | | Plus |
