Clone FMO06755 Report

Search the DGRC for FMO06755

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:67
Well:55
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG6933-RB
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO06755.5prime Sequence

446 bp (446 high quality bases) assembled on 2008-10-01

> FMO06755.5prime
TTATACGAACTTATCAGTCGACATGGGAGCAATCAATATGACGATCTGTG
TCGTGGCCGCATGTCTCCTAATGGCATCGCAGGCCACCGGCTACACGATG
GATGATCTGTGCCAACAGTGGTCGGGCTATGGATACATCGGCAATCCGAG
CAACTGCCATGCCTGGGGATACTGCAAGAACCAGGAGGTTGTGGCCTGGG
GCACCTGTCCCAACGGCTTGGTGTTCAACGCGCAGGCCGGCAGCTGTGAT
TACGCTAATACCACGGTGTGCTCCACCAATGCCGTTGAGACATGCTCCAA
CGTCAAATCTCCCATGTATGTGGCCAATCCGTTGAACTGCACCGAATACG
CCTACTGCGATGGCACAGGCCAAATCTCCTATGGCGATTGCGGCACCGGC
GGCGTCTATTCAGCATCCTCCACAAAATGTATATGGGGACCCGCCT

FMO06755.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:32:14
Subject Length Description Subject Range Query Range Score Percent Strand
CG6933-RE 1377 CG6933-RE 209..632 23..446 2075 99.3 Plus
CG6933-RB 1246 CG6933-RB 78..501 23..446 2075 99.3 Plus
CG6933-RD 1413 CG6933-RD 250..668 28..446 2050 99.3 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:32:12
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 20219247..20219665 446..28 2050 99.3 Minus
Blast to na_te.dros performed on 2014-11-28 20:32:13 has no hits.

FMO06755.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:45:51 Download gff for FMO06755.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6933-RB 69..501 15..446 98   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-01 13:27:56 Download gff for FMO06755.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6933-RB 69..501 15..446 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:04:43 Download gff for FMO06755.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6933-RB 69..501 15..446 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:04:43 Download gff for FMO06755.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 20219247..20219670 22..446 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:45:51 Download gff for FMO06755.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 20212347..20212770 22..446 98   Minus