FMO06757.5prime Sequence
494 bp (-60 high quality bases) assembled on 2008-10-01
> FMO06757.5prime
ATTCACAAAACTCCACGGCGTCCCTGGTAATCATACCTGCCCAAGCGACC
CACGCCGACGCCCACCTGACAGGACGAAGAAAGCAAGCGATCTAAGGAGA
AGAAAAAGAAGCGGGCCAAGAAGGTGCGTCGGTTGGTGAGCTACCAGGAT
GACACCCTGATTTCTGACGAGGACGAGGACCGCGCCGCAGCGTCCTCTAG
TGAAGAGGAGTCCAGCAGTGGCGACGAGAGCAATAGTTCCAATTCCCAGA
GCGAAGACAGTCCCAAAGCCAAGGATAAAAGCAATGCTGGTAGTGGTTCC
AAGGACGGTGACACGCCCATGGAGGTGGACTAGGAGCCGGCATGTTTCCC
GGTCTAAGAACGCACGGCTGATAGCTACGAAAAGGATGCCAAGTACGCCA
AGTACAAGTTCCAGCTGCCTCCCGCGCCAAAGGGGAAGCCGTCCGCCGAA
TTATGGCCTAAATCACTAAAATGTTCACAATGATGAACTATACC
FMO06757.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:32:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2063-RA | 1195 | CG2063-RA | 195..682 | 1..488 | 2230 | 97.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:32:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 9285887..9286353 | 488..22 | 2060 | 97 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:32:30 has no hits.
FMO06757.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:46:01 Download gff for
FMO06757.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2063-RA | 195..688 | 1..494 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-01 13:31:44 Download gff for
FMO06757.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2063-RA | 190..683 | 1..494 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:04:52 Download gff for
FMO06757.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2063-RA | 195..688 | 1..494 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:04:52 Download gff for
FMO06757.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 9285881..9286348 | 27..494 | 96 | <- | Minus |
| 2R | 9286415..9286440 | 1..26 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:46:01 Download gff for
FMO06757.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 5173386..5173853 | 27..494 | 96 | <- | Minus |
| arm_2R | 5173920..5173945 | 1..26 | 100 | | Minus |
