FMO06759.5prime Sequence
911 bp (911 high quality bases) assembled on 2008-10-01
> FMO06759.5prime
CAGTCGACATGCGAAAGTTGACTAGCTTCGTGTGCGGCACAGGAGCCGGA
CTGGCGGCTTACTACCTACAGCGGCTGCGGGACCCGCAGACGGTCGTGCA
GAACTCGTGGACGCACAGTGATAAGCCGGTGGATCCGTGGGCCCTTTGGG
ACACCAACTGGGATTGCCGGGAGCCACGGGCCCTCGTGCGTCCACTGCGA
AACAGCCAGCCGGAGGAGGAGAACCGCTACAACGCGGAGCTTGAGAAGGC
GAAGGCCAAGAAGGCGCGCCACATTATCCTAGTGCGGCATGGCGAGTATC
TGGACGTGGGTGACTCGGATGACACGCATCATCTCACGGAGCGCGGCCGC
AAGCAGGCGGAGTTTACTGGGAAACGGCTCTGCGAGCTGGGCATCAAGTG
GGACAAGGTAGTAGCCTCCACAATGGTGCGGGCCCAGGAGACTTCCGATA
TTATTCTCAAGCAGATCGATTTCGAAAAAGAGAAAGTGGTGAACTGTGCC
TTCCTGCGTGAAGGAGCGCCTATTCCGCCCCAGCCGCCAGTCGGCCACTG
GAAGCCGGAGGCATCTCAGTTCCTTCGCGACGGATCGCGCATAGAGGCCG
GCTTTCGCCGATACTTCCACCGCGCCTATCCCGACCAAGAGAAGGAGAGC
TATACCCTGATCGTGGGACACGGCAACGTGATCCGCTACTTTGTCTGCCG
AGCCCTGCAGTTCCCCGCCGAGGGTTGGCTACGGATTAACATTAATCACG
CTTTCATCACCTGGCTGACCATCAGTCCATCCCGGCAACGTGTCCATCCA
AGTACCTGGGCGACTCCGGCTTTATGCCCGCCGAAGCTGCTTACTAATCG
CATACCGCGCGACGTCAAAAACCGTGGTTGCAGGCTTTCTTGACCATTCG
TTTGGCGCGCG
FMO06759.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:07:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Pgam5-RA | 1100 | CG14816-RA | 36..902 | 9..879 | 4225 | 99.3 | Plus |
| Pgam5-RB | 1097 | CG14816-RB | 36..899 | 9..879 | 4170 | 99 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:07:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 1872973..1873530 | 566..9 | 2790 | 100 | Minus |
| X | 23542271 | X | 1872604..1872906 | 872..567 | 1350 | 98.4 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:07:50 has no hits.
FMO06759.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:17:16 Download gff for
FMO06759.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pgam5-RA | 36..905 | 9..883 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-01 13:36:09 Download gff for
FMO06759.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14816-RA | 2..877 | 5..883 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:50:56 Download gff for
FMO06759.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pgam5-RA | 36..905 | 9..883 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:50:56 Download gff for
FMO06759.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 1872595..1872906 | 567..883 | 97 | <- | Minus |
| X | 1872973..1873530 | 9..566 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:17:16 Download gff for
FMO06759.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 1766628..1766939 | 567..883 | 97 | <- | Minus |
| arm_X | 1767006..1767563 | 9..566 | 100 | | Minus |
