FMO06760.5prime Sequence
755 bp (755 high quality bases) assembled on 2008-10-01
> FMO06760.5prime
CAGTCGACATGCTGACAAACTGTGCCTCCAAAACACTGGCCGCCGTGCGC
GCCAACATCCGGGCAATTGCCACCAGCAGTGCCCGGGCCAGCGACAATCT
GTTCGTCCATCGCGACACACCGGAGGATAATCCCAACATCCCGTTCGAGT
TCACGGCGGAGAACAAGAAGCGCGTGGAGGCCATACTCAGCATCTATCCG
GAGGGGCACAAGCGCGGCGCCATGATCCCGCTGCTTGATCTGGCACAGCG
CCAGTACGGCTGGCTGCCAATCTCTGCCATGCACAAGGTGGCCGAGATTC
TCCAGTTGCCCAATATGCGCGTCTACGAGGTGGCCACTTTCTATACGATG
TTCATGCGCAAGCCCACTGGCAAGTATCACATCCAGGTGTGCACCACCAC
ACCATGCTGGCTCCGCGGATCGGACGACATCCTGGAGACCTGCAAGAAGC
AGCTGGGCATCGGCGTCGGCGACACCACCAAGGACAGGAAGTTCACCATC
TCGGAGGTCGAGTGCTTGGGCGCCTGTGTCAATGCGCCAATGGTGGCGAT
CAACGATGACTACTATGAGGATCTGACATCCAAGGACATGCAGGACATCC
TGAACGACCTGAAGGCGGATAAGATATCGCCCCCTGGGCCACGCAACGGA
CGCTTTGCCAGCGAGCCCAAAGGGCGAGCCCACTTCCCTGAGCGAGGAGC
CCAAGGGTCCTGGCTTTTGGTCTGCAAGCCGGTCTTGGCAAGCTTTCTAG
ACCAT
FMO06760.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:39:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5703-RB | 906 | CG5703-RB | 102..826 | 9..735 | 3570 | 99.6 | Plus |
| CG5703-RA | 1064 | CG5703-RA | 260..984 | 9..735 | 3570 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:39:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 17632589..17633109 | 47..567 | 2605 | 100 | Plus |
| X | 23542271 | X | 17633263..17633429 | 567..735 | 730 | 98.2 | Plus |
| X | 23542271 | X | 17632422..17632460 | 9..47 | 195 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:39:41 has no hits.
FMO06760.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:34:15 Download gff for
FMO06760.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5703-RA | 253..984 | 1..735 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-01 13:28:15 Download gff for
FMO06760.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5703-RA | 253..984 | 1..735 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:24:42 Download gff for
FMO06760.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5703-RA | 253..984 | 1..735 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:24:42 Download gff for
FMO06760.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 17632415..17632460 | 1..47 | 91 | -> | Plus |
| X | 17632590..17633108 | 48..566 | 100 | -> | Plus |
| X | 17633263..17633429 | 567..735 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:34:15 Download gff for
FMO06760.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 17526448..17526493 | 1..47 | 91 | -> | Plus |
| arm_X | 17526623..17527141 | 48..566 | 100 | -> | Plus |
| arm_X | 17527296..17527462 | 567..735 | 98 | | Plus |
