FMO06761.5prime Sequence
582 bp (582 high quality bases) assembled on 2008-10-01
> FMO06761.5prime
TCAAGCTGGCTCCGTGGAGGAGGTTTTCAGATCCCACCAGGTGGTACCCG
ACGTTATTCCCGAGCCGCCGAACCAGTTGTTAAAGGTCACGTACAGCAAC
AACCTGGTGGCCAAGGATGGAGTGGAGCTAACGCCCACCCAGGTTAAGGA
TCAGCCAGTCGTGGAGTGGGACGCGCAGCCCGGGGAGTTCTACACGCTCA
TTATGACGGATCCCGATGCCCCCAGCCGAGCGGAGCCCAAGTTCCGCGAG
TTCAAGCACTGGATTCTGGCCAACATCGCCGGCAACGACTTGGCAAGTGG
TGAGCCCATCGCCGAGTACATTGGCTCCGGCCCGCCCCAGGGCACGGGTC
TGCATCGCTACGTCTTCCTGCTGTACAAGCAGTCCGGCAAACTTGAGTTC
GACGAGGAGCGCGTGAGCAAGAGATCCCGCAAGGATCGCCCCAAATTCAG
TGCCGCCAAAGTTTGCCATCAATCACGAGTTGGGCAATCCCATTGCTGGA
ACTTTCTACCAAGCACCAGTACGACGACTATGTTCCAAAACTGCACAAGC
AACTTTCGGAGAATGCAAGCTTTCTAGACCAT
FMO06761.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:19:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17919-RA | 778 | CG17919-RA | 137..698 | 1..564 | 2770 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:19:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 6344528..6345007 | 83..564 | 2310 | 99.6 | Plus |
| 3R | 32079331 | 3R | 6344165..6344251 | 1..87 | 435 | 100 | Plus |
| 3R | 32079331 | 3R | 22466273..22466447 | 208..382 | 215 | 74.9 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:19:31 has no hits.
FMO06761.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:43:56 Download gff for
FMO06761.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17919-RA | 137..698 | 1..564 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-01 13:27:46 Download gff for
FMO06761.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17919-RA | 135..696 | 1..564 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:02:13 Download gff for
FMO06761.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17919-RA | 137..698 | 1..564 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:02:13 Download gff for
FMO06761.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 6344165..6344249 | 1..85 | 100 | -> | Plus |
| 3R | 6344531..6345007 | 86..564 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:43:56 Download gff for
FMO06761.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 2169887..2169971 | 1..85 | 100 | -> | Plus |
| arm_3R | 2170253..2170729 | 86..564 | 99 | | Plus |
