FMO06762.5prime Sequence
831 bp (831 high quality bases) assembled on 2008-10-01
> FMO06762.5prime
CAGTCGACATGTTCCCCAAAAGTCACATCGTTTTGGCCAGCTCTTTGCTG
TTGTTAATCGCCCTGCCAGTAATTCGCGCCGATCTCATGTGCTATGTGTG
CGATAATTGTGCCCAGCTACCGAAGGATGCACCCCTGCTGGCGTGCAATG
AGGATTTCTTTAATCCCGGCGGCAGCACAGAAGCCTCCACGGTGACCACC
ACCGAAGCGAGCACCACTACGACGCAGGAGACTACAACAACACCGGAAAC
AACCACTTTGATTGTGACAAGTGTCCAAACGGATTCACCCACAACGGAGT
CCACGACGACGACAGTGGAAACCACCACCAGCGATCCGACCACCGAGAGC
ACCCAGAGCACTGAAAGCACCGAGGCTCCGATACCCACGCCGGGAACCGC
CGGACCCGTCGAAACGACCACCGGAGTGCCCACGCCACCCGCTGAGGATC
TGTCCGCCATGTCGGTGGCCTTGAACACCACCCGTTTGGTGCCAGTGAAT
AAGGACGAGGGGACCACAACGCCCACGTCATCGCTGGCAATCAGGCAACG
CAGGGCGGTGATCGATACCGACTACACCTACCACTGCTATTCCGTTCAGG
TTTCAGTGAATGGCACAATGTCGACGGATCGCGGCTGCTCCCGGGTGAGC
ACCATGGAAGGTGTTTGCGAGCAGCTAAAGATTCAGAACAAAAACACGGA
GCTGGCCAACTGCAATCCGTGCAGTATGAACGCCTGTAACGGGCAGCTCG
GCGCTCCAGAGCTCCATTCTGGCCACCCTGCTCCTGGCCATCGTGGCATT
CGCCCTGCGCGCACGCAGCTTTCTAGACCAT
FMO06762.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:58:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7778-RB | 2152 | CG7778-RB | 185..990 | 8..813 | 3985 | 99.8 | Plus |
| CG7778-RA | 1237 | CG7778-RA | 185..990 | 8..813 | 3985 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:58:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 8349072..8349611 | 67..606 | 2700 | 100 | Plus |
| 2L | 23513712 | 2L | 8349742..8349944 | 605..808 | 970 | 99.5 | Plus |
| 2L | 23513712 | 2L | 8346804..8346865 | 8..69 | 310 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 18:58:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2376..2463 | 167..253 | 113 | 60.2 | Plus |
FMO06762.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:28:38 Download gff for
FMO06762.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7778-RA | 185..990 | 8..813 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-01 13:36:07 Download gff for
FMO06762.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7778-RA | 184..989 | 8..813 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:43:33 Download gff for
FMO06762.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7778-RA | 185..990 | 8..813 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:43:33 Download gff for
FMO06762.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 8346804..8346865 | 8..69 | 100 | -> | Plus |
| 2L | 8349075..8349611 | 70..606 | 100 | -> | Plus |
| 2L | 8349744..8349950 | 607..813 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:28:38 Download gff for
FMO06762.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 8346804..8346865 | 8..69 | 100 | -> | Plus |
| arm_2L | 8349075..8349611 | 70..606 | 100 | -> | Plus |
| arm_2L | 8349744..8349950 | 607..813 | 99 | | Plus |
