FMO06764.5prime Sequence
848 bp (845 high quality bases) assembled on 2008-10-01
> FMO06764.5prime
TTTATCAGTCGACATGTCGTTTCATTTGAGCACAAAAGAGCGCCTTCTGC
TCCTGATCGACGACATTGAGATGATTGCCAAGGAGTTGATCGAGCAGGCG
CACCAGAAGATCTCCAGCACCGAATTGGTGGACCTGTTGGATTTGCTGGT
GGCCAAAGATGAGGAATTTCGCAAAATGCTGGAACTGGCGGAGGAGCAGG
CGAAAGTGGAGGAGGCGATGGACCAACTGCGCGCTAAGGTCGAGGTGCAC
GACCGTGAGATCCAGAAGCTGCAAAAGTCGCTAAAGGATGCGGAGCTCAT
ACTGTCCACGGCCATCTTCCAAGCGCGACAGAAACTGGCCAGCATCAATC
AGGCCAACAAACGACCGGTTTCATCCGAGGAGCTCATCAAATACGCACAT
CGGATTAGCTCCGCCAATGCGGTCAGTGCTCCGCTCACCTGGTGCATAGG
TGACCTGCGGCGTCCCTATCCCACGGACATTGAGATGCGCAACGGGCTGC
TGGGTAAATCCGAGCAGAACATCAACGGCGGAACAGTGACCCACCAGAAC
AGCGGCATGCCCTCGGAGCAGCAGCGAACGCTGTCCGGTAGCGCAGGAAG
TGGGAGTGGCAGTGGCGCCGGCGGCGAGGTGCCCAATGCCTTCCAGAACC
AGTTTTAACTGGAATCTCGGAGAGCTGCACATGACCATGGGCGCCTCTGG
GAACACAGTGGCCCTGGAGACGCGCGCCCAGGACGATGTGGAGGTCATGT
CCACGGATAGCTCAAGCTCCAGTTCCAGCGATTCGCAGGCAAGCTTTCTA
GACCAATTCGTTTGGGCGCGCGGGCCCCGGGTAAGTGGTCATAATCAT
FMO06764.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:50:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| MED4-RA | 941 | CG8609-RA | 84..857 | 14..788 | 3850 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:50:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 7249613..7250149 | 788..251 | 2640 | 99.8 | Minus |
| 3L | 28110227 | 3L | 7250207..7250444 | 251..14 | 1190 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:50:31 has no hits.
FMO06764.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:56:26 Download gff for
FMO06764.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| MED4-RA | 78..857 | 8..788 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-01 13:27:40 Download gff for
FMO06764.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| MED4-RA | 74..853 | 8..788 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:20:30 Download gff for
FMO06764.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| MED4-RA | 78..857 | 8..788 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:20:30 Download gff for
FMO06764.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 7249609..7250149 | 251..790 | 99 | <- | Minus |
| 3L | 7250208..7250450 | 8..250 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:56:26 Download gff for
FMO06764.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 7242709..7243249 | 251..790 | 99 | <- | Minus |
| arm_3L | 7243308..7243550 | 8..250 | 98 | | Minus |
