Clone FMO06766 Report

Search the DGRC for FMO06766

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:67
Well:66
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG16719-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO06766.5prime Sequence

849 bp (849 high quality bases) assembled on 2008-10-01

> FMO06766.5prime
TTATACGAAGCTATCAGTCGACATGGAGAACGAACAGCAGAATGACCTGA
ACCAGTGGCTAAAGGAGCAGCGCATTATCCTGGATCTGAAAGCTCGTCGT
TCATTCTCCGATGTCTTGCCGGTGGCAAAGATTGTCAAGCGCAGTCATCC
TCGTCTGGTGGATCTGCACAACTATACGCCCAAGAGCAGCGTGGCCCTGA
AACTCCAGAGCTGGCAGACCTTCAATCAGAAGGTACTGAAGAAATTGGGC
ATCAATTTGACACGTTCGGAGCTGGAGCAGCTGGCGTCAGCAGCGCCAGG
AGCCATAGAATCACTGTTCCATGAACTAATCGCGGTGACCAAGTGCGCTA
GTCCCAGACCAAGACCCCGTCTGAGTGTATCGCCAACGAGCTCCCAAAAG
AGCGTGGTGATTAAAAAGTTGGCTAACAAGAATTCTGTGGTACGCACTCT
CAACCGATCCCTCACCCAAGTGATTGAGCGCTCCTGCTCGATCGATAGTC
AACCCCAGGTGCTGACCATGGACGTGAATGTTGTGGTCAATGGACAGATG
AAGAAGGTATCCAAGAAAGTGGTCGAGTACGAACACTATGCCAATGCTAT
TAGGGAGAGTGCCGAGAAGTCACGCTACATCAATTCCATTGCCGAGAGGG
CCAATCACCTGGAGAACACAATTGCCCTCAAGAATGAACGTATTGATGTG
CTACTCCATCAATGGCCAAACTATCCGTGAGCATTCTATCCATGCCACAC
ACCCTCACGGGACCGATGACGACACAGAGCTTCAATCCCGGTCTGACACG
CCGCCGACCCTGCTATGAATTCGGCACCTTTGCAAGCTTTCTAGACCAT

FMO06766.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:51:09
Subject Length Description Subject Range Query Range Score Percent Strand
CG16719-RA 1080 CG16719-RA 85..897 23..831 3965 99.5 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:51:06
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 9685255..9686067 23..831 3865 99.5 Plus
Blast to na_te.dros performed on 2014-11-28 19:51:08 has no hits.

FMO06766.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:20:38 Download gff for FMO06766.5prime
Subject Subject Range Query Range Percent Splice Strand
CG16719-RA 82..901 16..837 98   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-01 13:27:37 Download gff for FMO06766.5prime
Subject Subject Range Query Range Percent Splice Strand
CG16719-RA 82..901 16..837 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:22:04 Download gff for FMO06766.5prime
Subject Subject Range Query Range Percent Splice Strand
CG16719-RA 82..901 16..837 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:22:04 Download gff for FMO06766.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 9685252..9686071 16..837 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:20:38 Download gff for FMO06766.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 9678352..9679171 16..837 98   Plus