Clone FMO06767 Report

Search the DGRC for FMO06767

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:67
Well:67
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG6931-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO06767.5prime Sequence

930 bp (860 high quality bases) assembled on 2008-10-01

> FMO06767.5prime
CCTTATCAGTCGACATGATGAACAAGAAGCTCTCGCCAGAGGATGCATTT
TATGAAAATTTGACCCTCGGTCTGATAAGGACGCTATCCAATGTGCCAAG
GGTATGTAATGTGACGTTGGAGCGACGACAACCTCTGAATGCCTGCCAGT
TGGTGAATTGGGAGCAGAGGCACTGCGTCTACCTCCCGGAAGATATGAAG
AAGTTCTACCTATCTTCTGATGGCTTTATCTTAAACTGGAGCTACCAATA
TGCTCCCAACGATATTAGGCGCGTGGGTCACATTCACTTTCCGCACTTGC
TGCAAGTGACCCTTTTGCGGGAGAACATAGAAACCACATCGAGCCACTCC
AGCAATTCGACGGCTGTGCCCAATAGCAACTCGGATGTTGTGGGAGCAGC
CGGGAGCTCTCAATCCCTTCCAGCACCTATTGCCACCGGAAAAGACAAGT
GGGGCAATGCCACGCCTATTATAACGGCCAAATCGAAAATATTTGAGATC
AACAACGTAAACGAGGTGGCCAAGGTGTGTATGCTGTACGAATCTACCAG
TTCCAACAATCCCAAGTTCTATCTGCTAGAGCTGAGCACCCTGAGCTGGC
AGTTTTTGGCGGACACCTTTAGTGAATACCTTCGGATGGCCATCGCGCAC
TTGGGACTGCCGTACTGGGAGCTGTGCTTCTGCACCTGTGGCCTGCCCTC
TTGGACAGACAGCTGTTTCTTTTTGCTAGCACCTCATCTTCTCGAGGAGC
ACGAGCCCACGACGTGGACGAGTACTGAATCCCGCTTGCCAGCATCCGTA
CAATATCAATGATCCCAACATTTTTCGGGGGTAACCAAAAAGCGTGTCAA
AAGCAACGGCTAACAGCACCAAACAAAATTATAAAGCAAGCTTTCTAGAC
CATCCGTTTGGCCGCGCGGGCCCAGGAAAG

FMO06767.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:46:12
Subject Length Description Subject Range Query Range Score Percent Strand
CG6931-RA 1075 CG6931-RA 48..917 15..885 4150 98.6 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:46:10
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 11991481..11991842 523..885 1535 96.7 Plus
3L 28110227 3L 11991142..11991417 256..531 1380 100 Plus
3L 28110227 3L 11990917..11991084 88..255 840 100 Plus
3L 28110227 3L 11990783..11990855 15..87 365 100 Plus
Blast to na_te.dros performed 2014-11-28 20:46:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\Ulysses 10653 Dvir\Ulysses DVULYSS 10653bp AKA(S37633) Derived from X56645 (Rel. 38, Last updated, Version 6). 4281..4308 681..708 113 89.3 Plus

FMO06767.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:38:58 Download gff for FMO06767.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6931-RA 48..917 15..885 98   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-01 13:36:02 Download gff for FMO06767.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6931-RA 40..909 15..885 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:28:30 Download gff for FMO06767.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6931-RA 48..917 15..885 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:28:30 Download gff for FMO06767.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 11990917..11991084 88..255 100 -> Plus
3L 11991142..11991410 256..524 100 -> Plus
3L 11990783..11990855 15..87 100 -> Plus
3L 11991483..11991842 525..885 96   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:38:58 Download gff for FMO06767.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 11983883..11983955 15..87 100 -> Plus
arm_3L 11984017..11984184 88..255 100 -> Plus
arm_3L 11984242..11984510 256..524 100 -> Plus
arm_3L 11984583..11984942 525..885 96   Plus