FMO06770.5prime Sequence
928 bp (917 high quality bases) assembled on 2008-10-01
> FMO06770.5prime
CAGTCGACATGGGTTGCGATGGAGGAACTATTCCCAGGCGCGATGAGCTG
GTGCGCGTGAAGCAAAAGCCAGAGCAGAAAGACAAAGATGCGGAGAGGGA
GTTCCGTTGGCGCCACTGCACCTTGACCCAGCAAAGCCTCCAGGAGCCGA
TCGCCATGTGCGGCATGGGTAGGCTCTATTCCAAGCAGAGCGTCATTGAG
CGACTGCTGGAGAAGGAACCGATGCCAGAGACAGCTGCGCACGTGAAGAG
CATGAAGGACATTCGCCAGCTTAATCCCACACCCAATCCCGCCTTCACCG
AGGAGGACAAAACTGAGGGACTGCTGGACACACGACATTCTCCTTACATC
TGCAAGCTGATTGGCCTGGAGATGTCCGGCAAATTTCGCTTTGTGGCCCT
TTGGAGCTGCGGATGCGTTTTATCAGAGCGTGCCTTGAAACAGATCAAAG
GCAGTGTGGCTAGCACTTGTCCGCTGTGCCAGGCTGCCTATAGCGTTGAG
GACGTGGTGGTCCTCAATGGCAACGAGGAGGACATGGAGCTCATGCGGGT
CAAGATGGAAATGCGTGCGGCCAAGCGTAAGTCCTCCAAAAAGGACAAGA
AGAGTGCCAAAAAGGTGGAGGTGAAAGCGGAGCCCGCAGAGGAACAGGAG
CCAGTGGCGTCCACATCCAAGGCTGCAGCCGCAGAGAAGCCCACTACAAG
CACAAAAACCAAGGCGGTGGCGCCGGTCAAACGACTGGGCGCCGTTAATG
CAATTGCAAGATCCCGAACTGAAGCGTCTCAAGAGCGACTTCCGCGTGGC
CAAAGACCCCGAAGGCCAGCGAATGTTTACAAGTCCCTTTTCACCTCCCA
TAAAACCGAAAAAGGACCAGAAGCGCGCCCACTGGGTCACCTATAATTCA
TTCTACAATGCAGCTTTCTAAACCTTCG
FMO06770.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:40:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6443-RA | 1184 | CG6443-RA | 184..1081 | 8..909 | 4335 | 99 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:40:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 10729369..10730199 | 75..909 | 3900 | 98.9 | Plus |
| 2L | 23513712 | 2L | 10729239..10729308 | 8..77 | 350 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:40:08 has no hits.
FMO06770.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:53:27 Download gff for
FMO06770.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6443-RA | 184..1084 | 8..913 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-01 13:27:50 Download gff for
FMO06770.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6443-RA | 187..1087 | 8..913 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:15:11 Download gff for
FMO06770.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6443-RA | 184..1084 | 8..913 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:15:11 Download gff for
FMO06770.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 10729239..10729308 | 8..77 | 100 | -> | Plus |
| 2L | 10729372..10730202 | 78..913 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:53:27 Download gff for
FMO06770.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 10729239..10729308 | 8..77 | 100 | -> | Plus |
| arm_2L | 10729372..10730202 | 78..913 | 98 | | Plus |
