FMO06771.5prime Sequence
1092 bp (947 high quality bases) assembled on 2008-10-01
> FMO06771.5prime
CAGTCGACATGGGTGGAATATTTTCTGTAACTGGTCTTGGCATTCTGCTA
ATTGGCCTGATATGGCTGTTCGCCGCAAATGCCGATGAAGGGGTTCAAAG
TTCGCGCATATTGGCCGTGTTTCCTTTTCCCGGCCGATCGCAGTACATTT
TCGCTGAGCAGTTTATGAAGGAACTGGCCCATCGGGGTCACAATGTCACC
GTAATCAATACCTTTGGTAGCGATAAAAACGAGCCCAACTTTCGGGTGAT
TGGTGCTAAAAAAATTCACGAAATAATGGCGGCATTTGGAAATGCAGATT
ACACCCAAACGGCGAGTCAATGGCAAATGTTGACTATGACCACACAGTTT
CTCAATCTTTTGACCACAAGTATCCTGGATGATGCGGCTGTAAAGGATTT
ACTGAACAGCGGCGAGAAATTCGATTTGGTTATAATGGAAGCGGTGCAAA
CCGAAGCCCTCTTCGGTTTGATCCAGCATTTTGGAGCAGAAACCATAGGT
ATCTCATCGTACGGCACAGATACACACATCGATGAGTTAATGGGCAACAT
ATCGCCATTGTCCTACAATCCCTTGCTACTCTCATCGCGAACGGAGCAAA
TGGATTTCAAGGATCGTGTGATGAATGTGTTTGAAGCCTCGGTAATGTGG
CTGCACAAGAGGATTGTCCACCTGCCGTCTCAACGGGATCTGTATGCGAA
ATACTTTCCCACGGCCAGGAAATCATTGGATGAAGTTTTGGACAGCTTTG
CGCTAATGCTTCTCGGCCAGCACTTTTCCCTGAGCTATCCACGCCCCTAT
TTGCCCAATATGATCGAGGTGGGCGGACTGCATTTACAACGAAGCGAAGG
TTCAGCCCTTACCAAGGAACTGTCGGAATTTGTCGAGCATCGGAAAAGGA
GTATCTATTCTCATGGGTTCAATATCAAAGCAAGACTTGCCGCCATCACA
CGAAATGCTAATGCAACCTTTGGCAGTGGGCCCACACGTGTGCTTGTGAA
ATTCCAGGGTGATCAATTGCCCGGAACCCGATAATGTCTTCATCAGCAGT
GGGTCCCCACGAATTGCTACGAGTAGCTCTCATCCCACGGAG
FMO06771.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:07:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ugt35a-RA | 1781 | CG6644-RA | 41..1108 | 9..1058 | 4685 | 97.1 | Plus |
| Ugt86Dd-RB | 1671 | CG6633-RB | 700..805 | 727..832 | 215 | 80.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:07:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 11171501..11172284 | 1048..282 | 2940 | 95.5 | Minus |
| 3R | 32079331 | 3R | 11172351..11172624 | 282..9 | 1370 | 100 | Minus |
| 3R | 32079331 | 3R | 11127463..11127568 | 832..727 | 215 | 80.2 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:07:47 has no hits.
FMO06771.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:17:14 Download gff for
FMO06771.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ugt35a-RA | 41..1111 | 9..1063 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-01 13:35:59 Download gff for
FMO06771.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ugt35a-RA | 41..1111 | 9..1063 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:50:54 Download gff for
FMO06771.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ugt35a-RA | 41..1111 | 9..1063 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:50:54 Download gff for
FMO06771.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 11171487..11172283 | 283..1063 | 95 | <- | Minus |
| 3R | 11172351..11172624 | 9..282 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:17:14 Download gff for
FMO06771.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 6997209..6998005 | 283..1063 | 95 | <- | Minus |
| arm_3R | 6998073..6998346 | 9..282 | 100 | | Minus |
