FMO06772.5prime Sequence
1151 bp (968 high quality bases) assembled on 2008-10-01
> FMO06772.5prime
CAGTCGACATGTTTGATGTCTTTGGGTCCGTCAAGGGCCTGCTGAAGATC
GACCAGGTGTGCATCGACAACAATGTCTTTCGCATGCACTACAAGGCCAC
GGTGATCATACTGATCGCCTTCTCCCTCCTGGTGACCTCGCGCCAATACA
TCGGTGACCCCATCGATTGTATTGTGGACGAGATCCCACTGGGCGTGATG
GACACCTACTGCTGGATCTACTCTACGTTTACCGTGCCAGAGAGGCTAAC
GGGCATCACCGGACGCGATGTGGTGCAGCCCGGCGTGGGCTCCCATGTGG
AGGGCGAGGACGAGGTGAAGTACCACAAGTACTACCAGTGGGTGTGCTTC
GTCCTCTTCTTCCAGGCCATCCTGTTCTACGTACCGCGCTATCTGTGGAA
GTCCTGGGAAGGCGGACGCCTCAAGATGCTGGTCATGGATCTCAACAGCC
CTATTGTGAACGATGAGTGCAAGAACGATCGCAAAAAGATCCTGGTCGAC
TACTTCATTGGCAACCTGAACCGCCACAATTTCTACGCCTTCCGATTCTT
CGTGTGCGAAGCCCTGAACTTTGTGAATGTGATTGGACAGATCTACTTTG
TGGACTTCTTCCTCGACGGCGAGTTCAGCACCTACGGCAGTGATGTCTTG
AAGTTCACTGAGCTGGAGCCGGATGAGCGCATTGATCCCATGGCGCGGGT
CTTTCCGAAGGTCACCAAATGCACGTTCCACAAATACGGTCCATCCGGCA
GTGTGCAGACCCACGACGGTCTGTGCGTGCTGCCCCTGAACATTGTCAAC
GAAAAGATCTACGTGTTCCTGTGGTTCTGGTTCATCATCCTGGAGCATCA
TGTCGGGAATATCGCTTTATCTACAGATTCGCTGTTGTGGCGGGTCCCAG
CTCCCGCCTCCTCCTACTCCGAGCCCGTCCCGTTGGGCTGATAGCGAGGA
GTCGAACTGGTGGCCCAACAAGTGCACCATCGGCGATTGGTTCTGCTCCA
TTCACTGGCCAAGAACTTCGATCCGCTCTATCACCAAGGAAGGTGGATCC
CGGAACTTGTCCGCGAAATGACCGCCGATGAACCACGCGCCCCCAGCGCC
CTTCCCACGCCGGCAGCCTTTCTAAACCATTCCGTTGGGCCGCCGCGGGC
C
FMO06772.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:32:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Inx2-RD | 5266 | CG4590-RD | 244..1313 | 9..1081 | 4810 | 97.3 | Plus |
| Inx2-RC | 1832 | CG4590-RC | 458..1527 | 9..1081 | 4810 | 97.3 | Plus |
| Inx2-RB | 2758 | CG4590-RB | 244..1313 | 9..1081 | 4810 | 97.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:32:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 6999129..7000148 | 9..1028 | 4575 | 97.8 | Plus |
| X | 23542271 | X | 6974772..6974895 | 833..710 | 215 | 78.2 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:32:09 has no hits.
FMO06772.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:45:49 Download gff for
FMO06772.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Inx2-RB | 236..1281 | 1..1049 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-01 13:27:48 Download gff for
FMO06772.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| inx2-RB | 233..1278 | 1..1049 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:04:40 Download gff for
FMO06772.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Inx2-RB | 236..1281 | 1..1049 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:04:40 Download gff for
FMO06772.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 6999121..7000123 | 1..1004 | 98 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:45:49 Download gff for
FMO06772.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 6893154..6894156 | 1..1004 | 98 | -> | Plus |
