FMO06779.5prime Sequence
996 bp (922 high quality bases) assembled on 2008-10-01
> FMO06779.5prime
CAGTCGACATGGTATTCCAGTTGCCAACAACAACCGCCGCCCCGACCGGA
GGCGCAACATCGTCGTTTTCCTTCGGCCTCAGCACAGGAACACCAGCCGC
AGCACCAGCTTCAGGAGCAGCAACCACGGCTCCCGCCACAAAAACCACAT
TCTCTTTCGGAACACCGGCACCTACTGCTGGTATCGGTGGCGGAGATGCA
GACAACAGCAAGGCGCAGGCTCCACCAGCCTTTGGATTTGGCCTGGGATC
CGGGACTGCTTCAGCTCCCCTCACGCTGGGCACTCAAGCCGCCGCAAATC
CAGCGTCCACCACTTCTGCGACCGCGACTGGAACCTCTGCTGCTCCTCCC
GCCTTCGGAGGCTTTACGGCTCAACCAGCGGCATCTGTGGTGCCAACTAT
AGCAACCAGTGCACCCAACACCGCAGCTACCACAACTGGATTGCTGGGCG
GGTCTGGATTGGGAGCTCCCAAGACCACGGCCGCTGCGTCCACAACTCTG
ACTGCAGCTCCGTCGGCCATAGCCTCCACGCAGGGAGCTGCACCGGCCCC
AACTTTAAGTACTGGTGGTGCTTTTGCCAATCTCACTACCGAAACCAAGA
CCACAGACTCATCGGCCGTTTCCACGGCATCCCAATTGTCCTACCACCAA
CTTTGAGGAGCATATCAACAAGTGGACTCTCGAGTTCGAGGAACAGGAAA
AGGTATTCACCGAACAGGCCACTCAGATCAACGCATGGGACAAACTGCTC
ATCAGCACAACGGGGAGATCGTCGAGCTCAACGATGCCGTGAAAAAAGTG
AAACCGATCAGCAAGTGCTGGACCAGGAGCTGGAGTTATAGCCACGCAGC
AAAAAGAGCTTGAGGACAGCCTGGGACCGCTTGAGAAGGAATTCGTTATC
TCCCGAGGGTGGACTTGGAACGCAGCAATCTTACTGATGGTGAGAATCTG
ACACCACTGAAGCAATGTCGAGGATCAAAGAAATCATGACCAACTG
FMO06779.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:56:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Nup62-RB | 1345 | CG6251-RB | 97..1076 | 8..976 | 4525 | 98.2 | Plus |
| Nup62-RA | 1452 | CG6251-RA | 204..1183 | 8..976 | 4525 | 98.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:56:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 16344580..16345501 | 8..926 | 4335 | 99.2 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:56:20 has no hits.
FMO06779.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:19:33 Download gff for
FMO06779.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Nup62-RA | 204..1152 | 8..950 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2010-07-30 09:21:23 Download gff for
FMO06779.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Nup62-RA | 204..1152 | 8..950 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:43:38 Download gff for
FMO06779.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Nup62-RA | 204..1152 | 8..950 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:43:38 Download gff for
FMO06779.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 16344580..16345516 | 8..940 | 98 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:19:33 Download gff for
FMO06779.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 12232085..12233021 | 8..940 | 98 | -> | Plus |
