FMO06793.5prime Sequence
986 bp (-90 high quality bases) assembled on 2008-10-01
> FMO06793.5prime
CAGTCGACATGGAAATCGGCAACGATCCGTCCTATCAGGACTTCTTCGAC
AAGTTGCGAAGTGAATCGGGTCCTCGCAACTTGCGCCAGATCTTTGAGGA
CGACGATCGTCCGCTGGCGAACGAATCATCCAGCTTGCGCTATCAGCCAG
GCAGCTCCAAAAAATTGCAGGCTGGCAAAAGACCGGCCATGACCAGGAGT
AGCACCCAGGAGACGGGTGATTCACCGCCTGCCGCCTGGAACACGGCCAT
TGCCAAGGTGGTGCATGCCTATCGGAGCAGCGAGAACGTTGGACGCGTCG
GCCTGGCCCTCTCGATTCTGGGCGAGATGGAGGCCAGCAAGCTGATTGTC
TACCGCAGCAAGAGTCAGGTGCTGACCACGCTGCAGTTGACACCGCGTGG
CGGCAAGGTGATACTGCGCGAATCCTATCTGCAGTTCTACGATGACGAGC
AGCGCTTCTGGAGCCTGCAATTCGACAAGGAACCGGATGAGAAGGAATTC
ATAACGTTTATGGTCAAAACAAACTGCCAGTGGAGCACTATCTCAGCGAG
ATCTCATCCTCCAGCTCGGCATCGCCTTCGCGTGAGGATTTATCTAAGAT
CCGAACTAAAGCAACGGTTCACAAAGACGACGCCTAATCCGCCACAGCCG
CACCCACGTTCCCGCGTAACGCTGCCACGCTGGAAAAAGGCGGACGATGA
GGAACGCGAACGGGAAACAGAGACACCTTCCAATGAGGATGTGATAGTAA
CGGCAGTGCCGCGACCCATATGATCGTCAAATGCTCACAGGAAAATCATG
CAGTTCCCTGGCGATGGCCAACGCTTCAACGACACGATACTCCGTTGGCT
GTGACGACCCTGGACAAATATCTAGACTAACACGTGCCTCGGATGCGTAA
TGGAGCACAAAAGGTACGCCATTCTGCAGGCCATGAATCGCATGGCCGGC
ATCGACGTTGGCCCCAAAAGTCAATGGATCCGCTTG
FMO06793.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:28:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3342-RA | 1709 | CG3342-RA | 85..1033 | 8..950 | 4265 | 97.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:28:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 6526782..6527678 | 950..60 | 3785 | 96.3 | Minus |
| X | 23542271 | X | 6527751..6527804 | 61..8 | 255 | 98.1 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:28:50 has no hits.
FMO06793.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:32:03 Download gff for
FMO06793.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3342-RA | 78..1042 | 1..958 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-01 13:27:00 Download gff for
FMO06793.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3342-RA | 51..1015 | 1..958 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:04:44 Download gff for
FMO06793.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3342-RA | 78..1042 | 1..958 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:04:44 Download gff for
FMO06793.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 6526773..6527676 | 62..958 | 96 | <- | Minus |
| X | 6527751..6527807 | 1..61 | 91 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:32:03 Download gff for
FMO06793.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 6420806..6421709 | 62..958 | 96 | <- | Minus |
| arm_X | 6421784..6421840 | 1..61 | 91 | | Minus |
