FMO06796.5prime Sequence
687 bp (-75 high quality bases) assembled on 2008-10-01
> FMO06796.5prime
GACGACGTTATCAGTCGACATGGTTGTTGTAATGCACCTGACTCCTCCAA
AAGTCAATGGATGGACCCCGCTTCTGATGCTCATCTGCCTGACCGTAACG
CTGGGCACCACCATTCCAGTGGGCTATTTCTTTGGGGTTCTCAATGCCCC
GGCCGAGATCATCAAGAAGTGGTGCCAGGACATATTGGCGAACGAATACG
ACACTATCGTCACTGCCGGTCAGCTTGATATTCTATGGACTAGCATTGTG
TCCATCTACCTGATTGGAGGCATCTGCGGATCCTGCTTCAGCGCTGTGCT
TTGCGATAAATACGGCCGTAAGGGATGTCTGGTTATCAGTAGCGTACTAT
TCGTCGTTTCCGGCATCCTGTTCACCTGGTGTCGAGCAGCCAAATCGCTG
GAAATGCTGATGACTGGCCGCTTTCTAGGCGGCATCGCCTCCGCTTTGAT
CTTCACAGCTCAGCCCATGTATCTACTGGAATCCGCTCCATCGGAGCTCA
GTGGGAGCGTCGGAGTGTTCACCTGCATCGGTGTGACTGGTGGTATCCTG
CTCGCCCAGGTGGCCACTTTATCCCACTTGCTGGGGAGCGAGCGACTGTG
GCCTTATGCCTTGAGTTTCTACTCGTTATTGGTGATGGGCATCGTTTGGT
CCTTCTTTTGGTGGTTTCCCGGAAAAGTCCGCGGTGG
FMO06796.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:39:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| sut2-RA | 1608 | CG17975-RA | 40..707 | 15..687 | 3195 | 98.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:39:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 8087914..8088262 | 318..669 | 1610 | 99.1 | Plus |
| 2R | 25286936 | 2R | 8087574..8087858 | 34..318 | 1410 | 99.6 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:39:37 has no hits.
FMO06796.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:53:16 Download gff for
FMO06796.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| sut2-RA | 33..707 | 6..687 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-01 13:26:55 Download gff for
FMO06796.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| sut2-RA | 13..687 | 6..687 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:14:53 Download gff for
FMO06796.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| sut2-RA | 33..707 | 6..687 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:14:53 Download gff for
FMO06796.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 8087575..8087858 | 35..318 | 99 | -> | Plus |
| 2R | 8087915..8088278 | 319..687 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:53:16 Download gff for
FMO06796.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 3975080..3975363 | 35..318 | 99 | -> | Plus |
| arm_2R | 3975420..3975783 | 319..687 | 98 | | Plus |
