FMO06802.5prime Sequence
1138 bp (1026 high quality bases) assembled on 2008-10-01
> FMO06802.5prime
CAGTCGACATGGTCTCTTCTGGGCATTCATCCACTTATTCCTCAAAAACC
GAATCATCCAAATTCAGTGCTGGTCAATCCCACATTAGTTCTGGATCCGC
AACCATTGGAGCCTCTGGAACGCACGCTGCATCTGCCCACATCAAGACAG
AAAACAAGAAAGTTGAGTCATCGGGATCAAGCTCTATGCACGCCGGATCA
GGTTCTGCTTCCATCGGTGCTGGTCATCTGAATGTCCAATCTGCCGGAAC
TACCGGATCCTCCGAAGCTGCTTCAAACCACGCATCTATTGGTGTAGGAC
ACCTGAACATTGGAGCAACTGATTCCGCCTCTAAGGGATCCTCTGCCCTC
GGTTCATCTGGCCACTTGAGCATCGGATCAGCTGGAATCTCAGGATCTGC
TGGTTCTGGAGCCTCTGGATCACACACTGGATCTGCCCACATCAAGACAG
AGCACAAGAAAGTTGAGTCATCGGGATCTAGTTCCCTGCACACCGGATCA
GGTTCTGCCTCCATCGAAGCTGGTCATCTAAATATCCAATCTGCTGGAAG
TACCGGTTCCTCTCAAGCTGCATCTATTGGTGTCGGACATCTGAGCATTG
GATCAACTGATTCCGCTTCTAAGGGATCCTCTGGCACTGGATCATCTGGT
CACTTGAGCATCGGATCAGTTGGAATCTCTGGATCTACTGGCTCTGGCGC
CGGATCATCCAAGATCAACGCCGGACATTTGAGTATCGGAACCTCTGGAA
ATTCAGATCTGCTTCACTTGAAACAAATGGCCTGTCATAGGAGCAAACGG
ACACAACTCTAACACAGCTGGATCGATTGGACTAGCCGGTGCCCACGAGC
TGCGTCTCTGGCCCATGGAGTCGCCAGTGGTATACTGACCCCTGCTGTGG
TTCGGGAAGTCTCTCTCTCGGTGGTAGCACTGCCTCCTTGGGATCGAGCG
GATCTGCCAGCCAAGAGATATCGCCAGGGAAGTATCAGTCTGGGAGGAAA
TGGTCTAGCCTTGTGCATCTCCGCGGGAACTTCTGGAAATGCGGAATTGT
ATGGTGGCGCTCACTTGAGAATCATACGTGGCGGCGCTTTCTGGCGCAGC
TTCTGACATCCTTTGGCGCCGGCCAGTAATGGCCTAAT
FMO06802.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:18:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7300-RD | 3044 | CG7300-RD | 1568..2635 | 9..1064 | 4945 | 98.3 | Plus |
| CG7300-RB | 2835 | CG7300-RB | 1568..2635 | 9..1064 | 4945 | 98.3 | Plus |
| CG7300-RD | 3044 | CG7300-RD | 1666..1972 | 407..701 | 790 | 84.4 | Plus |
| CG7300-RD | 3044 | CG7300-RD | 1966..2260 | 107..413 | 790 | 84.4 | Plus |
| CG7300-RB | 2835 | CG7300-RB | 1666..1972 | 407..701 | 790 | 84.4 | Plus |
| CG7300-RB | 2835 | CG7300-RB | 1966..2260 | 107..413 | 790 | 84.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:18:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 10695472..10696476 | 1007..9 | 4730 | 99.2 | Minus |
| 2L | 23513712 | 2L | 10696072..10696378 | 701..407 | 765 | 84 | Minus |
| 2L | 23513712 | 2L | 10695784..10696078 | 413..107 | 765 | 84 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:18:37 has no hits.
FMO06802.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:43:33 Download gff for
FMO06802.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7300-RB | 1540..2627 | 1..1073 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-01 13:26:21 Download gff for
FMO06802.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7300-RA | 765..1852 | 1..1073 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:01:38 Download gff for
FMO06802.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7300-RB | 1559..2646 | 1..1073 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:01:38 Download gff for
FMO06802.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 10695472..10696484 | 1..1007 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:43:33 Download gff for
FMO06802.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 10695472..10696484 | 1..1007 | 99 | | Minus |
