FMO06804.5prime Sequence
881 bp (881 high quality bases) assembled on 2008-10-01
> FMO06804.5prime
CAGTCGACATGAAAAAGAAATATCGTTTGCGGCCAGTTAGATTTTCACCT
GAATCACCTGCAATCGAACGCAATTATCATACCGGCAAAATGGAAACCAC
AACACCTGTGCTCGACCTGTTGATGCCGCACAACTCAACTACTGTGGCGC
CTCCGAAAGCGCTCTATGCAAATCGAAATCGCCTGATTATTGGTGTTATT
ATCATGGTTCTGGGCGTTTTTGGCAATTCGCTGGCCCTTTTCATTTTGGC
GCGCAAGAAGCTCAACAAAAACAGCAAATACACGCTCATGCTGCGATGCC
TGGCGACCAACAATCTGGTGGCTCTACTGGGCATGCTGACCACGACGCTG
CTGAAAATGTATCTCTCAAAGGAAGTCCTGCAGTCGTTCATCCGAGTGGA
TTGCGTGGGACTCGTGGTTTGGCGATTTTTCGGGCTCAGTTCTGGATGCA
TTGCAGCAGTTATGGCGGCAGAAAGATGGATGGCCCTAGCCAGACCCTTT
ATCTACCACAAGCACATTACCTACGAGCTCATTCGCAAGAGCATCAACAG
CATTCTGATGATCGCCGTGGTGATCACGTTCCTGCCATTCGTTGGTTTTG
GTGCATACATCGATGAATCCAATCCGGACCAGCTTAAGTGTATACGATAT
CGCGATGCGCCGGGCGTGTGGAACAAGACGTATGCGGTGCTCTTTATGGT
CTTCGGTACCCTGCTGTGCATTGTAATCGTGGCCTGCACCTCTTCGTGGC
CCACACCTTTGCTCTGTGTGATCGAAGGAGTCGCACGGGCAAGCGGCATA
TGCACTACGACCTGATTTCCAGGGACAAAACAGTGCCATCAACATCGATC
CCGAAACAGCAGCGGCACCACCCTCTTACAG
FMO06804.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:39:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7497-RC | 1822 | CG7497-RC | 211..1081 | 9..876 | 4175 | 99 | Plus |
CG7497-RB | 1696 | CG7497-RB | 211..1081 | 9..876 | 4175 | 99 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:39:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 17633659..17633945 | 9..295 | 1435 | 100 | Plus |
3L | 28110227 | 3L | 17636318..17636535 | 295..512 | 1090 | 100 | Plus |
3L | 28110227 | 3L | 17636691..17636888 | 511..708 | 990 | 100 | Plus |
3L | 28110227 | 3L | 17636945..17637119 | 705..876 | 570 | 94.9 | Plus |
Blast to na_te.dros performed 2014-11-28 20:39:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsub\bilbo | 5540 | Dsub\bilbo 5540bp Derived from U73803 (Rel. 54, Last updated, Version 1). | 2733..2792 | 401..340 | 125 | 69.4 | Minus |
FMO06804.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:34:07 Download gff for
FMO06804.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7497-RB | 211..1086 | 9..881 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-01 13:25:34 Download gff for
FMO06804.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7497-RA | 211..1086 | 9..881 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:24:35 Download gff for
FMO06804.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7497-RB | 211..1086 | 9..881 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:24:35 Download gff for
FMO06804.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 17636319..17636535 | 296..512 | 100 | -> | Plus |
3L | 17636693..17636885 | 513..705 | 100 | -> | Plus |
3L | 17636946..17637124 | 706..881 | 93 | | Plus |
3L | 17633659..17633945 | 9..295 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:34:07 Download gff for
FMO06804.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 17629419..17629635 | 296..512 | 100 | -> | Plus |
arm_3L | 17626759..17627045 | 9..295 | 100 | -> | Plus |
arm_3L | 17629793..17629985 | 513..705 | 100 | -> | Plus |
arm_3L | 17630046..17630224 | 706..881 | 93 | | Plus |