FMO06807.5prime Sequence
840 bp (840 high quality bases) assembled on 2008-10-01
> FMO06807.5prime
CAGTCGACATGGGAAAATTCGAATACTCACTGGGTCTCAATGAGCTCAAA
TCCAAGGAGCTGCGATTGTGGCAGGCCTTGATTGGAGAATTCCTTGGCAA
TTTGATCCTCAATTTCTTTGCCTGCGGCGCATGCACCCAAATTGAGGATG
GCACCTTCAAGGCCTTGGCTTTTGGCCTGGCTATCTTCATGGCCATCACG
ATTGTGGGCCACTTGAGTGGTGGTCATGTGAATCCTGCCGTTACCGCTGG
AATGTTGGTCGCAGGACGAATTAGCTTGATCAGAGCCTTTTTCTATGTGG
TTTTCCAGTGCTTGGGTGCAATTGCCGGAACTGCAGCGGTTAAGATTCTC
ATCGATCAGGACTATTACAATGGCCTGGGTCACACCTCTCTGGCGCCCAA
TATCACCGAGCTGCAGGGCCTGGGAATCGAGTTCTTCCTGGGACTCCTGC
TGGTGCTCGTCGTCTTTGGGGCCTGTGATCCCCACAAGCCCGATTCCCGC
TACACGGCGCCCTTGGCCATCGGAATGGCGGTGACCCTGGGTCACTTGGG
CACCATCCGCTACACCGGGGCCAGCATGAATCCCGCTCGCACCGTGGGCA
CCGCCTTTGCCACCGACATCTGGGCGTCGCATTGGGTATACTGGGTGGGA
CCTGTGCTGGGGGGCGTGGCTGCCGCCCTGCTCTACACCCAGGTCCTGGA
GGCGAAGCCCGTGCCTAAGTTAACGAGGCATCCGAGAAGTACCGAACGCA
CGCCGATGAACGCGAGGTGAGAGTCAGGTGATAAGCGCCTGGAGCGAGGA
GTCCTTCTACGCAAGCTTTCTAGACTATTCGTTGGCGCGC
FMO06807.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:49:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7777-RB | 1386 | CG7777-RB | 216..1019 | 9..810 | 3955 | 99.6 | Plus |
| CG7777-RC | 1479 | CG7777-RC | 216..975 | 9..767 | 3760 | 99.7 | Plus |
| CG7777-RD | 1388 | CG7777-RD | 216..974 | 9..766 | 3755 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:49:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 11441066..11441535 | 343..810 | 2235 | 99.4 | Plus |
| 2R | 25286936 | 2R | 11439968..11440125 | 43..200 | 790 | 100 | Plus |
| 2R | 25286936 | 2R | 11440186..11440330 | 200..344 | 725 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:49:33 has no hits.
FMO06807.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:55:39 Download gff for
FMO06807.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7777-RB | 211..1019 | 2..810 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-01 13:24:08 Download gff for
FMO06807.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7777-RB | 208..1016 | 2..810 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:19:51 Download gff for
FMO06807.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7777-RB | 211..1019 | 2..810 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:19:51 Download gff for
FMO06807.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 11439970..11440125 | 45..200 | 100 | -> | Plus |
| 2R | 11440187..11440330 | 201..344 | 100 | -> | Plus |
| 2R | 11441068..11441535 | 345..810 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:55:39 Download gff for
FMO06807.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 7327475..7327630 | 45..200 | 100 | -> | Plus |
| arm_2R | 7327692..7327835 | 201..344 | 100 | -> | Plus |
| arm_2R | 7328573..7329040 | 345..810 | 99 | | Plus |
