FMO06813.5prime Sequence
516 bp (351 high quality bases) assembled on 2008-10-01
> FMO06813.5prime
CAGTCGACATGGAGAACTTTAAGGGTCTACAAAAATCCCTATACATATGG
ACGGACAGCGCCGACTTGGACAAGCGCGTGGAGCAACTAAAGGCGGCCAC
TGGCGGCGATGTGGCTTTGGAAAATGTGCACCGCCTTTCGTTTTCTTCCT
ATGCCAACTCCAGTTTCGACCTGATTGTGATCGAGTGCGCCCAGCTGACC
GACAGTTACGTAAAACTGCTGCACATGCTGAAACCGAGTGGCAAACTGCA
TTTGGTGTCCTACATCGGTCCGGCGGCTAGTTTGCTGCAGGAGATCAAGC
TATCCGGATTCATAAACTGTCGCGAGGACTCTCCAGATGCTTTGACCGCC
GAGAAGCCTGGCTACAAGACAGGAATCCTCAGCCAGGTTGTCATTTCCCA
AAAAAAAAACGCCAGTGCAAGTCAATGTGGGGAAAAAAAAGCGGGTGACC
AATGAAGGAACTGATCGATGAGGAGGACCTGCTTGGACAAAGAAAAAAAA
AAAGAAACCCGGATCC
FMO06813.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:06:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CIAPIN1-RA | 2358 | CG4180-RA | 87..553 | 9..483 | 2040 | 96.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:06:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 15038265..15038550 | 434..145 | 1195 | 96.6 | Minus |
| 2L | 23513712 | 2L | 15038640..15038775 | 144..9 | 680 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:06:56 has no hits.
FMO06813.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:16:43 Download gff for
FMO06813.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CIAPIN1-RA | 79..563 | 1..494 | 95 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-01 13:26:40 Download gff for
FMO06813.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| l(2)35Bg-RA | 75..559 | 1..494 | 95 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:50:27 Download gff for
FMO06813.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CIAPIN1-RA | 79..563 | 1..494 | 95 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:50:27 Download gff for
FMO06813.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 15038208..15038550 | 145..493 | 94 | <- | Minus |
| 2L | 15038640..15038783 | 1..144 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:16:43 Download gff for
FMO06813.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 15038640..15038783 | 1..144 | 97 | | Minus |
| arm_2L | 15038208..15038550 | 145..493 | 94 | <- | Minus |
