FMO06815.5prime Sequence
1097 bp (879 high quality bases) assembled on 2008-10-01
> FMO06815.5prime
CAGTCGACATGACGGAGCTGGGCATGGAGCTGGAGAGCGTTCGCCTGGCG
ACATTTGGGGAATGGCCCCTGAATGCCCCAGTTTCCGCGGAGGATCTGGT
CGCCAATGGTTTCTTTGCCACGGGAAACTGGCTGGAGGCCGAGTGCCATT
TCTGCCACGTGCGCATCGACCGCTGGGAATACGGCGATCAAGTGGCGGAG
CGCCATCGCCGCTCCTCGCCCATCTGCTCCATGGTTCTGGCTCCCAATCA
CTGCGGCAATGTTCCCAGGAGCCAGGAGAGCGACAACGAGGGAAACAGCG
TAGTGGACAGCCCGGAGTCCTGCTCTTGTCCCGATCTCTTGTTGGAGGCC
AATCGCTTGGTAACTTTCAAGGACTGGCCGAATCCCAACATCACGCCGCA
GGCTCTGGCAAAGGCAGGTTTCTACTACCTGAACCGTCTGGATCACGTGA
AGTGTGTTTGGTGCAACGGAGTGATTGCCAAGTGGGAGAAGAACGACAAT
GCCTTTGAAGAGCACAAGCGCTTTTTTCCCCAATGTCCTCGTGTGCAAAT
GGGCCCTCTTATAGAGTTTGCCACCGGGAAGAACCTGGATGAGCTGGGCA
TCCAGCCCACCACTCTGCCACTGCGTCCCAAGTACGCCTGCGTGGACGCC
AGATTGAGAACCTTCACCGATTGGCCCATTTCCATATTCAGCCCGCTTTC
GGCTTTGGCGCAGCTGGCCTATATTATCAGAAAATAGGCGACCAGGTGCG
CTGTTTCCACTGCAACATTGGATTGCGCTCCTGGCAGAAGGAGGACGAGC
CGTGGTTCGACACGCCAAGTGGTCGCCAAAGTGTCAGTTCGTTTGCTGGC
CAGGGTCCAGGCTATGGTAGCGAAGTGCTCGGCGACACAGCTGCAACGCA
ATTCCCAGCCAGCAACTGCTCCGGCTCCACGCTTCCAGCTGACGTACGGA
TTGGATTGACGCTCCGGCAAAGAAGTCCTAGCTTGGTATCGATGGAAGGA
GTTGGCGCATGCATCCAGGCAGCTCTTTGAATTCCGGCTGCCCTTCTCTT
CAACTTGGACAACTATTGCCATTGATTCTTGACCATGCCGGGGACAG
FMO06815.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:07:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Diap2-RB | 1997 | CG8293-RB | 39..1110 | 9..1069 | 4485 | 96 | Plus |
| Diap2-RA | 2106 | CG8293-RA | 148..1219 | 9..1069 | 4485 | 96 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:07:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 15933242..15933820 | 951..380 | 2240 | 96 | Minus |
| 2R | 25286936 | 2R | 15934199..15934570 | 380..9 | 1860 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:07:42 has no hits.
FMO06815.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:27:07 Download gff for
FMO06815.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Iap2-RA | 141..1171 | 1..1021 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-01 13:26:35 Download gff for
FMO06815.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Iap2-RB | 32..965 | 1..929 | 97 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:49:50 Download gff for
FMO06815.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Diap2-RA | 141..1171 | 1..1021 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:49:50 Download gff for
FMO06815.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 15933220..15933819 | 381..975 | 95 | <- | Minus |
| 2R | 15934199..15934574 | 1..380 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:27:07 Download gff for
FMO06815.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 11820725..11821324 | 381..975 | 95 | <- | Minus |
| arm_2R | 11821704..11822079 | 1..380 | 98 | | Minus |
