Clone FMO06817 Report

Search the DGRC for FMO06817

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:68
Well:17
Vector:pMK33-CFH-BD
Associated Gene/TranscriptHsp22-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO06817.5prime Sequence

563 bp (-68 high quality bases) assembled on 2008-10-01

> FMO06817.5prime
CTTTTAGGAACCTATCAGTCGACATGCGTTCCTTACCGATGTTTTGGCGC
ATGGCCGAGGAGATGGCACGGATGCCACGCCTCTCCTCGCCCTTTCACGC
CTTCTTCCACGAGCCGCCCGTTTGGAGTGTGGCGCTACCGAGGAACTGGC
AGCAGATTGCCCGCTGGCAGGAGCAGGAGTTCGCTCCGCCGGCCACCGTC
AACAAGGATGGCTACAAACTCACCCTGGACGTCAAGGACTACAGCGAGCT
AAAGGTCAAGGTGCTGGACGAGAGCGTTGTCCTGGTGGAGGGAAAATCAG
AGCAGCAGGAGGCCGAACAAGGTGGCTATAGCTCCAGGCACTTCCTCCGC
CGCTTCGTCCTGCCGGAAGGATACGAGGCGGACAAGGTGACCTCAACGCT
GAGCAGCGACGGCGTCCTGACCATCAGTGTGCCCAATCCTCCAGGCGTGC
AGGAGACACTCAAGGAGCGTGAGGTGACCATCGAGCAGACTGGCGAGCCG
GCAAAGAAGTCCGCCGAGGAGCCAAATGACAAAGCCGCCAGTCAGGCAAG
CTTTCTAGACCAT

FMO06817.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:32:04
Subject Length Description Subject Range Query Range Score Percent Strand
Hsp67Bb-RB 1900 CG4456-RB 1187..1708 24..545 2610 100 Plus
Hsp22-RB 968 CG4460-RB 255..776 24..545 2610 100 Plus
Hsp22-RA 1900 CG4460-RA 1187..1708 24..545 2610 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:32:02
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 9374251..9374772 24..545 2610 100 Plus
Blast to na_te.dros performed on 2014-11-28 20:32:03 has no hits.

FMO06817.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:45:45 Download gff for FMO06817.5prime
Subject Subject Range Query Range Percent Splice Strand
Hsp67Bb-RB 1187..1708 24..545 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-01 13:26:28 Download gff for FMO06817.5prime
Subject Subject Range Query Range Percent Splice Strand
Hsp67Bb-RB 1187..1708 24..545 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:04:38 Download gff for FMO06817.5prime
Subject Subject Range Query Range Percent Splice Strand
Hsp22-RA 1187..1708 24..545 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:04:38 Download gff for FMO06817.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 9374251..9374772 24..545 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:45:45 Download gff for FMO06817.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 9367351..9367872 24..545 100   Plus