FMO06825.5prime Sequence
923 bp (803 high quality bases) assembled on 2008-10-01
> FMO06825.5prime
CAGTCGACATGAAGCTGTACGTTTGCGTTTCGCTGGCCCTTTTGGCCCTT
TCGGCACCAGTTCCTTCCGATGCCCTGTTGGGCGCCAAATTGGCCCTGCT
CAAGGCCATTGGCGGCGGTCTGGGTGGCGGCAGCTCCGGCGGCGGTGGCT
ACTCCACCGGCAGTGGTGGCTATGGAGGCGGCTATGGCAGCGGTGGATAC
TCCGGCGGCTACAATCAGGGATATTACAACCAGCCCAGCAGACCGGTGTA
CAACTCCGAATACGGCAGTTCCTCATCCTCTTCCGCCAGCAGCAGCAGCA
GCTATGGAGGCAGCTATGGCGGTGGTTATGGCGGCGGCTACGGTGGTGGC
GAGCAGGTCATCAAGGTCATCAAGGTGGTGGAGCATCCCTCTTACTCTTA
CGGACGGTCCTCTGGCTATGGTGGCAACTATGGAGGATACTCGTCCAGTG
CCTCGTCCAGCGCCAGCGCCAACTCATACTCCGCTCCCTCTGTGAGCTAC
TCTGCTCCAGCTCCCGCTGTGACCTATTCCGCTCCTGCACCCGCTGTGAG
CTACTCTGCCCCAGCTCCCGCTGTGACCTACTCCGCTCCTGCTCCTGCCC
CCAGCTGTGACCTACTTCTGCTCCAGCTCCGGTGGTGCGCGTTTCAGGCC
GCTCCAGCTGTGACCTACTCCGCTCCTGCTCCTGCTCCAGCTGTGACCTA
CTCCGCTCCTGCTCCTGCTCCCACTGTGACCTACTCCGCTCCTGCCCCCG
CTCCTGTGGGTGCGAGTACATGCTGCTCCCGCTGTTACCAACTCCGCTTC
CCGCTCCCCGCTGTACCTAATCCCGCTCCCGCTCCCGCTGTGACCTACTC
CGGTCCCCGCTCCATGCTGAACCCTACTCCGCTTCCTGCTCCAATTCCGT
GGAGGGTATTCAGCCCCAGCTCC
FMO06825.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:17:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32564-RA | 1448 | CG32564-RA | 67..976 | 7..923 | 4095 | 97.3 | Plus |
| CG32564-RA | 1448 | CG32564-RA | 664..920 | 490..752 | 365 | 78.5 | Plus |
| CG32564-RA | 1448 | CG32564-RA | 741..937 | 651..856 | 335 | 80.3 | Plus |
| CG32564-RA | 1448 | CG32564-RA | 831..943 | 483..595 | 325 | 85.8 | Plus |
| CG32564-RA | 1448 | CG32564-RA | 708..778 | 684..754 | 295 | 94.4 | Plus |
| CG32564-RA | 1448 | CG32564-RA | 616..799 | 676..856 | 280 | 79.8 | Plus |
| CG32564-RA | 1448 | CG32564-RA | 831..919 | 510..598 | 280 | 87.6 | Plus |
| CG32564-RA | 1448 | CG32564-RA | 600..688 | 486..568 | 245 | 86.5 | Plus |
| CG32564-RA | 1448 | CG32564-RA | 649..772 | 502..630 | 245 | 81.4 | Plus |
| CG32564-RA | 1448 | CG32564-RA | 546..598 | 540..592 | 220 | 94.3 | Plus |
| CG32564-RA | 1448 | CG32564-RA | 856..943 | 481..568 | 215 | 83 | Plus |
| CG32564-RA | 1448 | CG32564-RA | 829..889 | 535..595 | 185 | 86.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:17:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 17206473..17207355 | 7..898 | 3800 | 97.4 | Plus |
| X | 23542271 | X | 17207237..17207349 | 483..595 | 325 | 85.8 | Plus |
| X | 23542271 | X | 17207114..17207184 | 684..754 | 295 | 94.4 | Plus |
| X | 23542271 | X | 17207237..17207325 | 510..598 | 280 | 87.6 | Plus |
| X | 23542271 | X | 17207139..17207272 | 556..686 | 245 | 83.8 | Plus |
| X | 23542271 | X | 17207022..17207088 | 676..742 | 230 | 89.6 | Plus |
| X | 23542271 | X | 17206952..17207004 | 540..592 | 220 | 94.3 | Plus |
| X | 23542271 | X | 17207006..17207058 | 486..538 | 220 | 94.3 | Plus |
| X | 23542271 | X | 17207262..17207349 | 481..568 | 215 | 83 | Plus |
| X | 23542271 | X | 17207114..17207165 | 564..616 | 185 | 94.3 | Plus |
| X | 23542271 | X | 17207235..17207295 | 535..595 | 185 | 86.9 | Plus |
Blast to na_te.dros performed 2014-11-28 22:17:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dmir\worf | 4174 | Dmir\worf WORF 4174bp Derived from AY144572. | 799..834 | 863..898 | 108 | 77.8 | Plus |
FMO06825.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:59:46 Download gff for
FMO06825.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32564-RA | 59..911 | 1..857 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-01 13:26:11 Download gff for
FMO06825.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32564-RA | 46..898 | 1..857 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:10:11 Download gff for
FMO06825.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32564-RA | 59..911 | 1..857 | 98 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:10:11 Download gff for
FMO06825.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 17206465..17207356 | 1..898 | 97 | -- | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:59:46 Download gff for
FMO06825.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 17100498..17101389 | 1..898 | 97 | -- | Plus |
