FMO06826.5prime Sequence
908 bp (904 high quality bases) assembled on 2008-10-01
> FMO06826.5prime
GAGCTGGTCAGCATCAGGCGCTTCCTGAAGGAGCGCCTCCAGCGAGACTA
CACCACCTTGAGGGGCTACGCAAAGGAGCGGTCCAATGTGCGCCTATTGC
TGCAACGCACAGCTGAAATGGGGGAATCCAACTCCTTGCTGCTCCTTGGG
CCGCGGGGATCCGGAAAGACAACGCTCATCAACTCCGTGCTGGCCGATTT
GCTGCCCAATAAATCGTTCGGGGAAAACACTCTCATCGTCCACCTGGACG
GTAATCTGCACACGGACGACCGAGTGGCCCTGAAGTCCATCACTGTGCAG
ATGCAGCTGGAGAACGCTGCGGATGGGAAAGTGTTCGGATCGTTCGCCGA
GAACCTCGCCTTCCTGCTGCAATGCCTCAAGGCGGGTGGCAAGCATTCCA
AGAGCGTGATCTTTATTCTCGAGGAGTTCGACCTCTTCTGTGCTCACCAC
AACCAGACCCTGCTCTACAACCTCTTCGACGTCTCCCAGTCAGCCCAGGC
GCCCATCTGTGTACTTGGCGTTACCTGTCGCCTCGACGTGATCGAGCTGC
TGGAGAAGCGGGTCAAGTCGCGTTTCTCGCACCGGCAGGTCTTTCTCTTT
CCCAGCTTGCGGCGCTTTGAGGATTACGTTGACCTGTGCGGGATCTACTG
TCCCTCCCGACCGGCAATTCACTGTTGCTGGCGGCGGAGAAAATCTATAA
CCTACAAAACATCCAGTCGGGGGCACTTTACTTCTCCCGCAACCATTTTG
ACCCGGGGAGTACGGCTTTTCGCCCAGACTACGCGATGCCTGGAACAAGC
AATATGCAAAGTCCTGGCACTCAGCAGGCAGAAGCACCCTCCAAGCGCTT
CCATGACTTCGACATTAGCGAAGGCTATCTCAGAAACTTCCCTATCCGGC
TGGGGCAA
FMO06826.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:07:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Orc4-RA | 1615 | CG2917-RA | 141..1035 | 1..891 | 4270 | 98.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:07:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 24796320..24797041 | 891..174 | 3255 | 98.6 | Minus |
| 2R | 25286936 | 2R | 24797101..24797274 | 174..1 | 870 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:07:25 has no hits.
FMO06826.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:24:22 Download gff for
FMO06826.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Orc4-RA | 141..1038 | 1..895 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-01 13:26:08 Download gff for
FMO06826.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Orc4-RA | 131..1028 | 1..895 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:00:13 Download gff for
FMO06826.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Orc4-RA | 141..1038 | 1..895 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:00:13 Download gff for
FMO06826.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 24796317..24797040 | 175..895 | 98 | <- | Minus |
| 2R | 24797101..24797274 | 1..174 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:24:22 Download gff for
FMO06826.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 20683840..20684563 | 175..895 | 98 | <- | Minus |
| arm_2R | 20684624..20684797 | 1..174 | 100 | | Minus |
