FMO06828.5prime Sequence
1143 bp (995 high quality bases) assembled on 2008-10-01
> FMO06828.5prime
CAGTCGACATGCTGAAGCATTTTGCACGATGGCGTCTGGGCAGCCAGTTG
CTAAAGGGATGTGCCGCACCAGTGAGGCAAGCCTCCAAAACCTCCAGCGC
AGAGAACCTGATAGCCGGCACAGAGGAACCCCAAAAAAAGTTCGTCAATC
CGTTTTCCCAGCCCGCTCCTGCGTTAAGTAATGATACGATATCAGAGAAC
AAGGAGGAACGGGATAAGCGACTCAAGGTGCTGCAGCTGGAGGCGGACAT
TGCCCACCAGGAGGGTCGGCGGGTGCCGTCACTGGAATTCTTTAAGGATC
ATCATTGGGAGCACGTGCTGACGCTACCCACAAAATCAGCTAGGATCAAG
TACTTTGGCTATCTCTGGCAAATCGAGATGAAGAAGGAGGCGGATCAACG
CAAGAAGGCAGAGCGAGCGAAGGAAGCCGAGCGGCGGGTTGCGGAGATGC
GAAAGGAGCGCGAGGAGAATACGCACATTATCTATGGCCTGGGACACACA
TCGTTGTTTCTGCGTATCTATGATACCACTATTAATCACTGGCAGAACAA
CCGACTCACACGGGCCATGCAGTTTGCCCCCAAAATGGTTTTGGATTGCT
CCTACGATGAGCACATGAACAATCGGGAGGCTACCTATGCAGCAAAGCAA
TTGATGATGTGCTTTGCGGAGAACCGGATGAATGATGAGCCCTTCGATCT
GCACTATTGCAACACCCAGATGGACAGCAGATGCATGCAGAGCCTCCAAC
GCTACATCCCCACCATGCACAATCCAGAGTTCCCGATAAATTTGCATAGC
AAGTGCTTTACGGAACTCTTTCCCAAGCAGAACCTGGTCTACTAACGCCC
CACTGCCGGGAGGATCTGGTCACTTACACCCAGATGACATCTACATCGTG
GCCGCCATGGTAGACACTATGAACAACGAACCTCTTTCGCTGGTCAAGCC
AAACGATTGGGCCTTCGGGATGGCGAGACTGCCCCTGATCGCTACTACGT
TGGGGTTCCGGTTCGGGAAAGTCGCTAACTCTAAAACAGATGATCACTTA
TGCTGACCTCAGAAAACCGGCGACTGGGATACGCTTGAGCATGTCCGTTC
GAAGGTCGTGCAATCGATTCCAGCCGCGCAAGGAAAGTCCTTG
FMO06828.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:01:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5190-RA | 1453 | CG5190-RA | 93..1234 | 9..1134 | 5145 | 97.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:01:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 18451376..18452458 | 9..1083 | 4850 | 98.4 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:01:56 has no hits.
FMO06828.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:59:47 Download gff for
FMO06828.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5190-RA | 93..1246 | 9..1143 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-01 13:26:03 Download gff for
FMO06828.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5190-RA | 72..1225 | 9..1143 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:36:13 Download gff for
FMO06828.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5190-RA | 93..1246 | 9..1143 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:36:13 Download gff for
FMO06828.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 18451376..18452529 | 9..1143 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:59:47 Download gff for
FMO06828.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 14338881..14340034 | 9..1143 | 97 | | Plus |
