FMO06832.5prime Sequence
669 bp (666 high quality bases) assembled on 2008-10-01
> FMO06832.5prime
CCCTTATACGGAACTTATCAGTCGACATGGAGTCCCCAACCTCGCACCTG
GTGGCCAAGGATTTCCAGGTGACGGGTGTTTCGCGCAGCGGACGCGTACG
CAAAAAATCGTCGAAATTGTTGGATTTTGAATCTCCGGATGAGATCGAGA
AGCGCACAAGGCGTCACAGTGGCGCCAGACAGCCAGCCAGATATTCGGGC
CGCGGCAGGCCATCGAATGCGCTGCGTGATCTGGATCTTGACCAGGAGAT
GCTCGTGGATGATGGCATTATCTCGGATAGCGAGGAATTCCATCCGGATA
CAACGGCAACGGTCGTGGCCATTCTGAATTCCGACGATGAACTGGACAAT
CTGGTGCAGGATATCGTCGATGGTGTCCAGGCGGAGGCCACCAGCCAAGA
GTCATCCGTCCGTCAGAGTCTTTACATGCGCGAGAAGTCCAACAAGCGGC
AGGTGCTCAAGGACGGCAAGGTGGTGAGTGCCAAGGTGCAGCGCAAGGAC
AAGGGCAAGCAGCGCTACACCGCCTACAGTCTGTGGGCCAAGGAGGCGCG
ACAGAAGGATCTCCAGGATCTAGACTTCACCAGCGCGACCAGACGCCTCA
GCGAGCTGTGGGCGAACGTTTCCAATCGGGACAAGAACACCTGGCGGCGC
AAGGCCAAATCGAGGCGTC
FMO06832.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:06:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4617-RC | 1819 | CG4617-RC | 96..741 | 25..669 | 3205 | 99.8 | Plus |
| CG4617-RA | 1694 | CG4617-RA | 96..741 | 25..669 | 3205 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:06:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 7103792..7104305 | 573..60 | 2570 | 100 | Minus |
| X | 23542271 | X | 7103633..7103731 | 669..572 | 445 | 99 | Minus |
| X | 23542271 | X | 7104361..7104396 | 60..25 | 180 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:06:53 has no hits.
FMO06832.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:16:41 Download gff for
FMO06832.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4617-RA | 93..741 | 19..669 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-01 13:25:55 Download gff for
FMO06832.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4617-RA | 100..748 | 19..669 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:50:25 Download gff for
FMO06832.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4617-RA | 93..741 | 19..669 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:50:25 Download gff for
FMO06832.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 7103633..7103729 | 574..669 | 98 | <- | Minus |
| X | 7103792..7104304 | 61..573 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:16:41 Download gff for
FMO06832.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 6997666..6997762 | 574..669 | 98 | <- | Minus |
| arm_X | 6997825..6998337 | 61..573 | 100 | <- | Minus |
