FMO06833.5prime Sequence
1092 bp (988 high quality bases) assembled on 2008-10-01
> FMO06833.5prime
CAGTCGACATGGAGCACGAGGTGGCTGTTTCAGGAGGGGATTCCTCGCTG
GAGGAGATCACTGGCAGTTCGAAACTCAAGCCCTCCAAGAACACGGCCAT
CAAGTGCCTGAAATGCGACAAGGTGTACATATTTCCGTCAGATAAAGATG
ACTGCCTGGCGCATTTGTATATGGAGCACCGACTGGTCATCGCCGATGTG
GAGGATATAGCGCTTCTGGAGGACTACCTCCAGTACTGGGAAAAGGAGTT
TCACACCCACGAATTCGAGCAATATTGCACCACAATGTTCCTGGATCAGC
TGCCCGATGGCAAGTACGCCAAGAACGAAAAGTACTACCTGCTGTGTGAC
ATCCTGCCCCAGGACTACGAGCTGCGGCGAAGGTTGAAGGAGAAGCGCCT
AAGTGAAGCCCTGGAGCGACATCAGTTCGAGCTAACCGACCGCACCTTCT
CCAAGGAGTGCCTTTTCTGCAGGGCCATCATCAAGGGATTGAGGGCGGAC
TATCTGGACCATCTGTTTGACAAGCACTTTCTGTTGGTCGGCAAGCCCGA
GAAGCTGGTGTATGTGGACGAACTGCTGGATCACCTGGAGGAGAACTTGA
ATCGGTTAATGTGCCTCTACTGCGAGAAGATCTTCAGGGATCGGCCCACG
CTCAAGGAACACATGCGCAAGAAGGGCCACAAGCGGATCAATCCGAACCG
AAGGGAGTACGACAAGTACTTCCTTATCAACTACAATCGTGTACCAACGG
CCCCCACGCCCCGGAAACAGCACCTCCAAAAGCGAAGACGGGAAACGGCA
TCCGTGTCCACAGTTGCTGATCCTGAAACCGGCAGCGTGGACTTCGACAA
GCACTTCGCTCGCCTGATTCGGATGCCGAACACGATTCGGACTGGTCGGA
TTGGCGGCAAATGGTGAGCCCTAGCTCCATTAGTGCCTGTTTTGCACCAT
CTCGGCGACACTTCCACCGCCCCTCAAGAGCCACATGCACGAGGTCATCG
CTTGGATTCGAGAAGGCCACCCAGCTCTTCTGAACTTCTACCAACGCGTC
AAGGTGGTCCAACCTACTGGCGCCCGCCAAATGTTGCCTGCC
FMO06833.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:18:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9890-RA | 1460 | CG9890-RA | 40..1120 | 9..1091 | 4960 | 98 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:18:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 23063115..23063920 | 1059..256 | 3445 | 97.9 | Minus |
| 2R | 25286936 | 2R | 23063975..23064221 | 255..9 | 1235 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:18:28 has no hits.
FMO06833.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:43:29 Download gff for
FMO06833.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9890-RA | 40..1114 | 9..1084 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-01 13:25:52 Download gff for
FMO06833.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9890-RA | 44..1118 | 9..1084 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:01:32 Download gff for
FMO06833.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9890-RA | 40..1114 | 9..1084 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:01:32 Download gff for
FMO06833.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 23063093..23063920 | 256..1084 | 97 | <- | Minus |
| 2R | 23063975..23064221 | 9..255 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:43:29 Download gff for
FMO06833.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 18950616..18951443 | 256..1084 | 97 | <- | Minus |
| arm_2R | 18951498..18951744 | 9..255 | 100 | | Minus |
