FMO06834.5prime Sequence
657 bp (657 high quality bases) assembled on 2008-10-01
> FMO06834.5prime
AGCGAGACAGCCAGATTATCTTCGGCGAGTTCTCCTGGCCGAAGAGCGTG
AAGACCAACTATCTCAAATATGGATCCGGTAAGAAGGGCGCTCCACGTGA
GTACTACACGCTGGAGTGCCTGCTGTACCTGCTCAAGAATGTGATGCTGC
AACACTCGGTCTACGTGCGACAGTGCGCCGCCGAGGATATACCCGCTGTG
AATCGGCCGGATCGTAAAGAGCTCCTGGCCTATCTGAATGGCGAGACGCC
AACGTGTGCCAGCATCGACAAGAGTGCCCCGCTGGAAATCCCCACTCAGG
TGAAGCGTGCCGCCGAGGGTGAACCTTCCAGCGTTGAGGTGGCTGCCAAG
AAGGCCCGCTTCGAGGAGACTCAAGTGCAGAAGGTGCGCGAGCAATTGGC
CGCCCGATGGGATGTCAACCAGAAGGAGACCGCTGTCAACATGGACAACA
TCAAGTCGCTGTCCGAGACGATGTCCGTTGAGAAGATCGCCGCCATCAAG
GCAAAGCGTCTGGCCAACAAGCGAACGACCATTAAAAGGACGGACAATGA
CGAGGCCATGGGAACTGATTTGCGTGCCATCCTGGACTATGATGTGGACT
CCACAAAGGACATTATCAGCAGAGAACGGCAGTGGCGCACGCGTACTTCG
ATTCTGC
FMO06834.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:39:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| hyx-RB | 2479 | CG11990-RB | 513..1169 | 1..657 | 3270 | 99.8 | Plus |
| hyx-RA | 2221 | CG11990-RA | 255..911 | 1..657 | 3270 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:39:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 9040167..9040751 | 73..657 | 2910 | 99.8 | Plus |
| 3R | 32079331 | 3R | 9040020..9040092 | 1..73 | 365 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:39:33 has no hits.
FMO06834.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:34:09 Download gff for
FMO06834.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| hyx-RA | 255..911 | 1..657 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-01 13:25:50 Download gff for
FMO06834.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| hyx-RA | 233..889 | 1..657 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:24:36 Download gff for
FMO06834.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| hyx-RA | 255..911 | 1..657 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:24:36 Download gff for
FMO06834.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 9040020..9040092 | 1..73 | 100 | -> | Plus |
| 3R | 9040168..9040751 | 74..657 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:34:09 Download gff for
FMO06834.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 4865742..4865814 | 1..73 | 100 | -> | Plus |
| arm_3R | 4865890..4866473 | 74..657 | 99 | | Plus |
