FMO06838.5prime Sequence
1086 bp (-82 high quality bases) assembled on 2008-10-01
> FMO06838.5prime
CAATCCACATGCTGTTGCGTCGCGTTCTGGGCTACGGAGTAGTCGGCGCC
GGACTGGCCTCCGCCGGCTGGAGCCTGCACACCAACGACTACGATCCCAA
CTCACTCGGAATCGTCCGGCTGTCGCGATCCGCCGCCGCCGTCTTGGACG
TGGCACTCACCTACAAGCGGGAACTTTACTACAAGGAATGGGATAAGGAG
ACGCCCGAGTACAAGGCGGAAAAGAGCCGGGTCCACAAGATAGCCGCCGA
GAAGCTACTTCAGCTGATCTGCATAAACAAGGGTGTCTACATCAAGGTGG
GCCAGCACATAGGGGCCTTGGAGTACCTGCTACCCAGGAGTTTGTGCAGA
CCATGAAGGTACTTCACTCCGATGCGCCGCAAAACCCCATTGAGGACCTG
TATAAGGTAATCCGACAGGATCTGCACTGCAATCCGGAAGAAATCTTCCA
CAGCTTCTAGAGGGAGCCGCTGGGAACTGCTTCCCTTGCCCAGGTACATA
AGGCGCGCCTCAAGACCGGCGAGCTGGTGGCCGTGAAGGTGCAACATCCC
TACGTTAAGGGTAACTCCCGCGTTGACATGAAGACCATGGAACTGGCCGT
TAATGTGCTGGCTCGGATATTTCCCGACTTCAAGATCCACTGGCTGGTTG
AGGAGTCTAAAAAGAACTTGCCTTCGAACTCGATTTCCTAAACGAGGGAC
GTAACGCCGATAAAGTATCCCAGCAGATCAAGAAGAACTCGTGGCTTCGG
GTGCCCATATATACTGGAAATATACCTCTTCTCGAGTCCTAATCAGGAGT
ACCTGGAGGGAGGGCATGTCACGGACTTGGACTACATACGCGAAACAAAA
TTGACTCATTTGCGGTGCCAATCGCATTGGGCCAGCTCTACTCCGAGATG
ATCCTCCGCACCGGTTTCGTGGCACAGCGATCAGCATCTATGAAACCTCT
TGGTAAGACGCACGCCGGAAAACAGTCTGAAAATAAGTCTGCTGGATTCC
GGGCTGATGCCAATCTGACGGACTATTTCCGACGATTATTTCCATCTCCG
GCTGGAGAATCCTTAAGGTGGACCGCAAAAGCGATG
FMO06838.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:38:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3608-RB | 1901 | CG3608-RB | 294..1376 | 9..1086 | 4645 | 96 | Plus |
| CG3608-RA | 1736 | CG3608-RA | 129..1211 | 9..1086 | 4645 | 96 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:38:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 24612175..24613251 | 9..1079 | 4355 | 95.9 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:38:45 has no hits.
FMO06838.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:53:00 Download gff for
FMO06838.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3608-RA | 129..1211 | 9..1086 | 95 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-01 13:25:39 Download gff for
FMO06838.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3608-RA | 127..1209 | 9..1086 | 95 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:14:25 Download gff for
FMO06838.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3608-RA | 129..1211 | 9..1086 | 95 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:14:25 Download gff for
FMO06838.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 24612175..24613257 | 9..1086 | 95 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:53:00 Download gff for
FMO06838.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 20499698..20500780 | 9..1086 | 95 | | Plus |
