FMO06843.5prime Sequence
535 bp (535 high quality bases) assembled on 2008-10-01
> FMO06843.5prime
TAAAGGCCAAGACTGCGAATCCCGGCTGGCATCACTTTTCCCTTTGACCA
GGAAAATCTGGAGGAGTGTATCACCCAGCTGATGGCTCCCAACCAGATGG
ACCCTATGATGCGGTACCTGGACGAGAATATCAAACTCGAACGGGAGCTG
CAGAAATTCGTGGATACGGAGCAGCAAAATTTCCTGGACGACCAAGCCGA
AAAGCTACTCAAACAGGCGGCCAACGAGGAGATGGACATCGAGGCCATTG
TGCGGGACACAGAGAGGCTGTACAAGGAGGAACTACTGCAATTTGCCGAT
CGTGTGGGTCCCAGCGATGCTGACATATTCGCCCAGAGCTTCCATCGCCT
GGTGCACTCTTCGTCCCTGGAGGACATACTCAAGCGAGAGCGTGCATATG
CCAAGGTGGTGTCCGACATGACCGATCTTATGGACAGCGAGGTGGAGACG
TTGAACAACTCTCAGCAGCAGGAAATGGATAGCCAGATAAATCAGTTGGA
CATCACCACCACCTCGGAGGATATCAACAATCTGC
FMO06843.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:28:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9986-RA | 2179 | CG9986-RA | 143..678 | 1..535 | 2655 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:28:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 28606411..28606812 | 134..535 | 2010 | 100 | Plus |
3R | 32079331 | 3R | 28606221..28606354 | 1..133 | 620 | 99.3 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:28:40 has no hits.
FMO06843.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:31:58 Download gff for
FMO06843.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9986-RA | 143..678 | 1..535 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-01 13:25:23 Download gff for
FMO06843.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9986-RA | 85..620 | 1..535 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:04:38 Download gff for
FMO06843.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9986-RA | 143..678 | 1..535 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:04:38 Download gff for
FMO06843.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 28606221..28606354 | 1..133 | 99 | -> | Plus |
3R | 28606411..28606812 | 134..535 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:31:58 Download gff for
FMO06843.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 24431943..24432076 | 1..133 | 99 | -> | Plus |
arm_3R | 24432133..24432534 | 134..535 | 100 | | Plus |