FMO06844.5prime Sequence
841 bp (841 high quality bases) assembled on 2008-10-01
> FMO06844.5prime
CAGTCGACATGGGCTTTGACGAGAAGCGTGAGCCCACCGGCGGCAGACTG
CGACTGCAGGACATTCCGGCCCTCACCCAGGACCACTGCCGCATGCGGGA
TCCGGCGGAGGTGGAGCGCATCATCAACGAGTTCGTCATCGGCGGACCAG
AGCGCATGCAAATCGTCTCCGACTTCGACTACACCATCACCAAGCAGCGC
ACGGAGGATGGAGGAGCAGTGCCCTCCAGTTTCGGGATCTTCAACGCCTG
CCAGTCGCTGCCGGAAAACTTTAAGGCGGAGACGGACAAGCTGTACCACA
AGTACCGGCCCATTGAGATCGATCCCCACATGCCCATCGCCGAGAAGGTG
CAGTACATGATCGAGTGGTGGACCAAGTCTGGCGAACTGACCAGCGGCTT
CCCCTTCGACCAGTCGGAAATAGATCAGATAGCCAGCAAGTACACGCATG
CGCTACGTGACCGCACCCACGAGTTCTTTGCGGACCTCCAGCGCTTGGGC
ATTCCCACGCTTGTCTTCTCCGCCGGGCTGGGCAACTCGGTGGTCTCGGT
TCTTCGCCAGGCCAACGTTTTGCATCCGAACGTGAAGGTAGTCTCGAACT
TTCTTCAGTTCCGGGATGGCCTTCTAGATGGCTTTCAGCAGCCGATGATA
CACACCTTCAACAAGAACGAAAACGGTGCTAAATGAGACCAGCGAGTATT
ACGACTTGGTGCACACCAGGGACCACATCATAGTCATGGGCGACTCAATT
GGTGATGCAGACATGGGCCTCCGGGGTGCCTGCCTCCTCCACATCATGAA
AATCGGCTTCCTCTTCGAACACGTAGAAGCCACCAGAAGAA
FMO06844.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:39:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| cN-IIIB-RA | 1530 | CG3362-RA | 375..1207 | 9..841 | 4045 | 99.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:39:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 24195872..24196694 | 9..832 | 3960 | 99.5 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:39:28 has no hits.
FMO06844.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:34:05 Download gff for
FMO06844.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3362-RA | 366..1207 | 1..841 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-01 13:25:20 Download gff for
FMO06844.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3362-RA | 322..1161 | 1..839 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:24:34 Download gff for
FMO06844.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| cN-IIIB-RA | 366..1207 | 1..841 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:24:34 Download gff for
FMO06844.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 24195863..24196704 | 1..841 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:34:05 Download gff for
FMO06844.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 20083386..20084227 | 1..841 | 98 | | Plus |
