FMO06851.5prime Sequence
1151 bp (1006 high quality bases) assembled on 2008-10-01
> FMO06851.5prime
CAGTCGACATGATGACGACCGACTTCGCGGGCAGCCAGTTCGTGTCCAGC
AATCCCAACACCAGCTGTAGTGCATCCCGCTGGCTAACGGAGGAGGTCTT
TAAACTAATCGAAATTGTGCAGCGCGACGAGGCCATCTACAATCCGAGGC
ACAAATACTACTTTTGCCGCCCGTACGTGGAGAACTTTTGGCGCGAGGTG
GATTTGAAGCTGGAAAAGAATCCGGGCGCCAGTCTGGCCAAGTGGACCAA
TTTGCGCATCTCGTTCCGACGAGAGTACACCAACTATCTGGAGGAAAAGG
TGCCACCCTGCTGGTCCTACTTCGACCGCATGTTCTTTCTGCATCCGTAT
CTACGCAAGAAGCACCAGCAGCCCAAATCGCTGGACACACAGGTGCAGGA
CGCCCTGGCACACCTCTCGAACCTTTCTAGTCGTATGCAGCGTGAGCGTT
CAGTGACCATTCCGGGCAGCAGCAGTATTGGTGGCCAGCCCACGCCCTCC
GCCCACCAGTCACCACCTGCACAGCAGCTGGACAACTATCTGGACTACTT
TGACGAGGCGGAACACAACAACTCCGAGCTGGATGACATCATGGAGGAGG
AGCAGCAGCGCAACAGTCGTTACCACGGCCAGTTGGACGGCAACGACATT
AAGTCGGAGTGCGAGGAGCCGGTGGATGACTACGAACAAGAGGCGCACGA
GCCCGAGGAGGATGAACAGGATGACCAGGACCTACACAAGATGGCGCCTA
CTTCTAGCTCTTCATCGGCGGGAGGCCCAGCGTCGTTATGCCAACCAGCA
TTCACACGGCAGCCGAATGCTTCCGGGTCGCCTCCAAATGCGCACCTACC
ATGACGAGATGCGTGGCGCTATTCGTCCGCGTTCCCAGGAACTCCAAGCT
CCAACTGCAGCAGTGGCCGGGGTCAACTACTCTGCACAGCCGACTGCCCA
TCCAACATTTCGTTTGTGCGACCTACTTTCAGCAGCCCGTGGATTTGGTT
AGCACTACAACGCACGCGAGGCGAGAAGAAGAGGTGTTCCAGGAACTGCT
GCTTATCCGAAGCGGAACTGGCACACCATCCCACGTGCGGCGGGGCACCC
CGAATTGCGCCCAGTAGTCGGTAATGCAGCGATACCAATGCTACTTGAGA
T
FMO06851.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:06:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6276-RA | 1806 | CG6276-RA | 156..1272 | 8..1118 | 5160 | 98.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:06:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 15318785..15319767 | 1070..94 | 4515 | 98.7 | Minus |
| 3R | 32079331 | 3R | 15319821..15319914 | 101..8 | 455 | 98.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:06:47 has no hits.
FMO06851.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:16:36 Download gff for
FMO06851.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6276-RA | 147..1283 | 1..1127 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-01 13:25:05 Download gff for
FMO06851.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6276-RA | 124..1260 | 1..1127 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:50:21 Download gff for
FMO06851.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6276-RA | 147..1283 | 1..1127 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:50:21 Download gff for
FMO06851.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 15318726..15319765 | 96..1127 | 97 | <- | Minus |
| 3R | 15319827..15319918 | 1..95 | 95 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:16:36 Download gff for
FMO06851.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 11144448..11145487 | 96..1127 | 97 | <- | Minus |
| arm_3R | 11145549..11145640 | 1..95 | 95 | | Minus |
