FMO06855.5prime Sequence
1161 bp (961 high quality bases) assembled on 2008-10-01
> FMO06855.5prime
CAGTCGACATGCAGAACTCCTTTCTTCCACTGAACACACGGCGTTTTCGA
CAGCGGGCCCAGGTGGAAACGCCGGATACGGTGTACTGGGACCGACTGGC
GAAACCAGAACTACTCAAGGAGCACAACACCATCGATTATTTGGACTTCA
GTCCAAGCGATCCTGACAACTTTGTTGTGACCTGTTCGGTGCGCGTTCAG
ATTTACAACCTGGTGACCATGCTTGTGGTAAAGAACCTTTCCCGATTCCA
AAAGACCGCATACGGCGCCACCTTCCGGCAGGATGGTCGACTCCTGGCCG
CCGGCGACGAGGAGGGCCATGTCAAGCTATTCGACACCACCAGTCGCAAC
ATCTTGCGTTTGTTCAAGGGACACACGGCACCAGTACACCGCACCTTCTT
TACGGCGGACAAGCTGCAGCTAGCCAGTTTTGGAGACGACAAGTCGGTCC
GTCTGTGGGACGTGGCAAACGAGAAGGTGGTGCAAACGTACGAGGACACG
CACACCGACTACGTTCGTGCAGGCGCCATGCATCCGCAGGCAGGGCATAT
GTTCGTCTCCGGCGGCTACGATGGCAAGATCAAACTGTACGATACGAGAG
CGGAAACGGCGGTGCAGCGCACCTTAGATCACGGAGCTCCGGTGGAGTCC
ATGTTGTTCCTTCCGAACGGCTCTATTTTCGTCAGCGCCGGCGGCAGCCA
GGTGCGCGTATTGGGATCTCATCAGCGGCTGCCGTCTGCTCACCATGATG
TCGCAACATCACAAAACAGTAACTTGTCTGCGACTGGGATCCGATGGCAG
GAGATTGCTCTCAGGCGGGCTCGATAGGCACGTGAAAATCTACGATGTGA
GCACCTACAAAACAGTGCACACATTTGACTTATCCCCATGCGGTGGTCAG
CATGGCTGTTGCTGGACGGAGATTCAGGCAGTTGTGGCTGGAATGGTCGA
ATGGTCTAGTCTCATTCTTCGCATGAATGGTAGAACACAAGCCCAGTCTT
TTGAAAAGAATCCTGGCGGATCGCGCTCGAAAGTTCTTCGGGAGTACAAT
CCACGAACACACCCCAGAAAGTTGATTCCACCACAAGGGACAACGTCAAG
GGGCCTGAAATGAATCCTACGATGTCACTTGCGCCCAGTTTAACTCAAAA
AGGGCTTTGAC
FMO06855.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:37:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3071-RA | 1921 | CG3071-RA | 60..1193 | 9..1144 | 4970 | 96.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:37:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 2263056..2264089 | 101..1135 | 4220 | 96 | Plus |
| X | 23542271 | X | 2262896..2262988 | 9..101 | 465 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:37:28 has no hits.
FMO06855.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:33:37 Download gff for
FMO06855.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3071-RA | 52..1211 | 1..1161 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-01 13:24:54 Download gff for
FMO06855.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3071-RA | 47..1206 | 1..1161 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:35:57 Download gff for
FMO06855.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3071-RA | 52..1211 | 1..1161 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:35:57 Download gff for
FMO06855.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 2262888..2262988 | 1..101 | 96 | -> | Plus |
| X | 2263057..2264115 | 102..1161 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:33:37 Download gff for
FMO06855.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 2156921..2157021 | 1..101 | 96 | -> | Plus |
| arm_X | 2157090..2158148 | 102..1161 | 96 | | Plus |
