FMO06858.5prime Sequence
1155 bp (804 high quality bases) assembled on 2008-10-01
> FMO06858.5prime
GAAGTTATCAGTCGACATGGGTTGCTTTGGGTCGCCCACCTCCAAGCAGT
CGGACGTGAACTCGGAGGACTCGAAGAGCCAGAAGCGCCGGAGCGATGCA
ATATCTAGACAGTTGCAGAAGGACAAACAGCTCTACAGGGCCACACACAG
GCTGCTCCTCCTGGGGGCGGGCGAGTCCGGCAAATCAACCATAGTCAAGC
AAATGCGAATATTGCATGTCGACGGATTTTCTGACTCGGAAAAGAAACAG
AAAATTGATGATATTAAAAAGAATATTCGAGACGCTATCTTGACTATTAC
AGGAGCCATGAGCACACTTAATCCACCTGTAGCTTTAGAAAAGAAGGAAA
ATGAACCCAGAGTGGAGTACATTCAGGATTATGCATCTAGTCCGGACTTT
AATTATCCTCCTGAATTTTATGAACATACAGAAGAACTATGGAAAGACAA
GGGCGTTCTTCAAACCTATGAGAGGTCGAATGAGTATCAATTAATCGATT
GTGCGAAATACTTCCTGGACCGAGTGAGCACAATCAAGAATCCAAACTAC
ACCCCTAATGAGCAGGATATTCTTCGGTGCCGTGTTTTGACTTCTGGAAT
ATTTGAAACAAGATTTCAAGTGGACAAAGTAAACTTTCACATGTTCGATG
TCGGTGGCCAGCGGGACGAGCGTAGGAAATGGATTCAGTGTTTCAATGAT
GTAACTGCTATCATATTCGTAACTGCGTGCTCAAGTTATAACATGGGTTT
TGCGGGAAGATCCCACCCGAAACCGACTTCGAGAATCTTTGGATTTGGTT
CAAGAGTATTGGAACAACAGATGGGCTTCGCACATTTCTATTATACTAAT
TTTTAAATAGCAAGAATTGGTTAGCAAAGAAAATAAGGCTGGAAAAAGTA
AATTGTCGGAATATTTCTCCGAGTTAAAAATACCAACGCCAATCGACACA
GGTGACGCATTATGGATTCCATGAATGACCGAAAGTTAACGAGCAATATT
TCCTACGAAACGAGTTTCGGCGTATATCTTCGCTTAGCGGAGAAGGAAAC
ACTACTGCTTATCCACATTTTCCATGCGCCGTTGAACAAAAAAATTAAAG
GTGGGGTTTAAAGGATTTGCCAAAACATATATTCCAGGGATCCACTCTTT
CTCAA
FMO06858.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:09:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Galphas-RD | 1646 | CG2835-RD | 300..1395 | 17..1103 | 4650 | 96.2 | Plus |
Galphas-RB | 1859 | CG2835-RB | 513..1608 | 17..1103 | 4650 | 96.2 | Plus |
Galphas-RE | 1826 | CG2835-RE | 489..1575 | 17..1103 | 4505 | 95.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:09:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 23944465..23944740 | 17..292 | 1380 | 100 | Plus |
2R | 25286936 | 2R | 23945898..23946077 | 640..820 | 730 | 97.3 | Plus |
2R | 25286936 | 2R | 23945696..23945824 | 511..639 | 645 | 100 | Plus |
2R | 25286936 | 2R | 23944960..23945080 | 390..510 | 605 | 100 | Plus |
2R | 25286936 | 2R | 23944806..23944905 | 292..391 | 500 | 100 | Plus |
2R | 25286936 | 2R | 23946139..23946241 | 824..925 | 280 | 91.3 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:09:46 has no hits.
FMO06858.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:25:10 Download gff for
FMO06858.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Galphas-RB | 511..1608 | 13..1103 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-01 13:24:47 Download gff for
FMO06858.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
G-salpha60A-RB | 508..1605 | 13..1103 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:01:29 Download gff for
FMO06858.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Galphas-RB | 511..1608 | 13..1103 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:01:29 Download gff for
FMO06858.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 23946137..23946261 | 821..942 | 91 | -> | Plus |
2R | 23944463..23944740 | 13..292 | 99 | -> | Plus |
2R | 23944807..23944903 | 293..389 | 100 | -> | Plus |
2R | 23944960..23945080 | 390..510 | 100 | -> | Plus |
2R | 23945696..23945824 | 511..639 | 100 | -> | Plus |
2R | 23945898..23946077 | 640..820 | 97 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:25:10 Download gff for
FMO06858.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 19833421..19833600 | 640..820 | 97 | -> | Plus |
arm_2R | 19831986..19832263 | 13..292 | 99 | -> | Plus |
arm_2R | 19832330..19832426 | 293..389 | 100 | -> | Plus |
arm_2R | 19832483..19832603 | 390..510 | 100 | -> | Plus |
arm_2R | 19833219..19833347 | 511..639 | 100 | -> | Plus |
arm_2R | 19833660..19833784 | 821..942 | 91 | -> | Plus |