FMO06861.5prime Sequence
1122 bp (923 high quality bases) assembled on 2008-10-01
> FMO06861.5prime
CAGTCGACATGGCCGCAGGAGCTGATACCCAACTGGAGCACATGTGCCGT
CTGCAGTTCGACTCGCCAGTGCCCCATGTGCGTCTGTCCGGAATCGTGTG
CACCATCGGACCTGCCTCCAGCAGCGTGGAGATGCTGGAGAAGATGATGG
CCACCGGCATGAACATCGCGCGCATGAACTTCTCTCACGGATCGCACGAG
TACCATGCCGCCACCGTGGCCAATGTGCGCCAGGCGGTGAAGAACTACTC
GGCCAAGCTGGGCTACGAACACCCCGTGGCCATTGCCCTGGACACCAAGG
GGCCCGAGATCCGTACCGGTCTGATCGGAGGCAGCGGCACCGCCGAGATT
GAGCTGAAGAAGGGCGAGAAGATCAAGCTGACCACCAACAAGGAATTCCT
GGAGAAGGGCTCTCTGGAGATTGTGTACGTGGACTACGAGAACATTGTCA
ATGTGGTGAAGCCCGGCAACCGGGTGTTCGTCGATGACGGTCTGATCTCA
CTGATTGTCCGCGAGGTAGGCAAGGATTCCCTCACCTGCGAGGTGGAGAA
CGGCGGCTCTCTGGGTTCCCGCAAGGGTGTGAACCTGCCAGGCGTGCCCG
TCGATCTGCCTGCCGTCTCCGAGAAGGATAAGAGCGATCTGCTGTTCGGT
GTGGAGCAGGAAGTGGACATGATCTTTGCTTCGTTCATCCGCAACGCCGC
TGCTTTGACCGAGATCCGTAAGGTTCTTGGCGAGAAGGGCAAGAACATCA
AGATCATTTCCAAGATCGAGAACCAGCAGGGCATGCACAACCTGAACGAG
ATCATCGAGGCCGGTGATGGGATTATGGTGGCCCGTGGAGATCTGGGTAT
TGAGATTCCCGCCGGAGAAGGGGTTCCTCGCCCAAAGGCCATGATTGCCC
GCTGCACAGGCTGGAAGCCTGTGATCTGCCCCACTCAGATGTTGGAGTCA
TGGTGAAGAGCCCACGTCCCACCTCGCGCTGAAATTCCTTGAATGTGGCC
AACCGCTGTTGCTCCGATGGTGCTGATTGCGTCATGTTGTTCTGGTGAAG
ACCGCCAAGGGCGAGTACTCGCTGAATGGCTTCTGAACATGGCCAGACCT
GCAGGAGGCCGAGCTTGCCCTC
FMO06861.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:01:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| PyK-RA | 2109 | CG7070-RA | 304..1418 | 7..1122 | 4940 | 97 | Plus |
| PyK-RB | 1958 | CG7070-RB | 153..1267 | 7..1122 | 4940 | 97 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:01:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 22370797..22371860 | 7..1074 | 4555 | 97.6 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:01:37 has no hits.
FMO06861.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:59:34 Download gff for
FMO06861.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| PyK-RB | 149..1099 | 1..950 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-01 13:24:34 Download gff for
FMO06861.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| PyK-RA | 374..1324 | 1..950 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:36:02 Download gff for
FMO06861.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| PyK-RB | 149..1099 | 1..950 | 98 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:36:02 Download gff for
FMO06861.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 22370793..22371743 | 1..950 | 98 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:59:34 Download gff for
FMO06861.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 18196515..18197465 | 1..950 | 98 | == | Plus |
