FMO06862.5prime Sequence
1122 bp (1032 high quality bases) assembled on 2008-10-01
> FMO06862.5prime
CAGTCGACATGAGTATCTGGCCCATTCGAACACTACCAAATTCCAAAATG
CGTAGTTGCATGATGGAGCTCGGTCGCACCAATCGCCACACGGATTGCAC
ATTTATAATTGAGGATGAGAGCGGTGGCAGTCAATCGTTTCCCTGCCACA
AATTGCTATTCAGCTGCGCCTCCGATGTGTTCGATCGCATGCTCTATGGC
GACTACATTGAGTCTACTAGCGGAGTTGTCAGACTAAATGATGTACAACC
GGATATATTTGAGAAATTCCGAGACTATGTCTACGGCTATGAGTGCGATA
AACTGCAGAAGTACGACTTTGATACTCTGATTCGCCTCTGTGAGTTTGCT
AACAAATATCTGGTGCAATCTCTCGAAGAGGACTGTGTAAAGGATTTGCT
GATACGCAAGAACACTTTTGACATGGGAGAGTTACTTCGTCTATTCCAGT
GTGCGCATCGCATGAATCGCAAGTCGTTAATAAATCAGATAGCCTGGGAG
CTAAAGTGCACCTTCAAGAGCACCTTGGACCACTCTGGCGTATACGAATT
CAATTGCGAGGTATTTAAACACTATATCGAAGTGATTGCTAGCAAAATAT
CGGAGGCAGATCGTTTCCGTCTGCTGGAAATGTATCTAAAATATAATGGT
ATCGAGGAATTGGAAAGCGCGGGGCAAGTGGATAGCCAGGATGCAACTGA
AGCCAACACCACCACCATCACCACCACCAACGAAGTGGAAAATCAAGAAT
CGGAACTTCCGTCCACTAGCTGCGTTCCGCTCAAAACTGAATGCAGTTTT
GCCGTTCCAAATAAGAAGGCAAGTTTTGTCAGCGATCTACTTGCACTGAT
TGATTTTGGCAAACTTTCGCCCAGGAATTCTACGATGGACCCGGCAAATC
CAAATTTCCTTAGCTGGCTGAGAGTACGAGATATGTATCAATCGCCAAGA
CTGCGTTACGGCCAAGATGAACTGCAGCTGAGATGGCATTGACACGAACA
GAAGCCCCCCCTACCTTCGATCCCGACGCATAGTTATAATGGGAGGAGCT
TATGCCGGACGAATCACGGCTTCTTCGGTACTTTCGCATTACTTCCGACC
ATCGTTCGTATCGGCCTGTAGC
FMO06862.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:39:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11714-RD | 3514 | CG11714-RD | 146..1243 | 9..1092 | 4945 | 97.8 | Plus |
| CG11714-RA | 1650 | CG11714-RA | 146..1243 | 9..1092 | 4945 | 97.8 | Plus |
| Fuca-RC | 3513 | CG6128-RC | 146..1243 | 9..1092 | 4945 | 97.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:39:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 11521468..11522507 | 1047..19 | 4540 | 97.8 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:39:25 has no hits.
FMO06862.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:34:03 Download gff for
FMO06862.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11714-RA | 140..1243 | 1..1092 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-01 13:24:32 Download gff for
FMO06862.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11714-RA | 140..1243 | 1..1092 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:24:33 Download gff for
FMO06862.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Fuca-RC | 140..1243 | 1..1092 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:24:33 Download gff for
FMO06862.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 11521420..11522513 | 15..1092 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:34:03 Download gff for
FMO06862.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 11514520..11515613 | 15..1092 | 97 | | Minus |
