FMO06864.5prime Sequence
889 bp (10 high quality bases) assembled on 2008-10-01
> FMO06864.5prime
CAATCCACATGGCAACACTTAACAAATTCACAAAAACGCTGTCCATTGAT
GAAAAGGCGGAGATCAAGGAGAAATTCATAGAGTTGGATGCCAACAAAGA
TGGCTTCCTCAATCTGCACGAGCTAAAGGAAGCCCTCACCCAGGTGGGCT
TCTCGCTGGCCGGCTACCAGGTGCGCGAAATGATTGACCAGTACTATGGC
AAACAGCTGACTGCCTTCCAGGGCAAATTGAATCTGGAAGAATTCGAGGC
ACTGTGCCTGGACCTGAATAGCAAAGATGTGGCCTGCACATTCAAGACGG
ACGCCTCCAAGAAGGAGAACTTGGATACCCTGGGCGGCATGTCGAGCATT
TCCTCGGAGGGCACCACCCATTCGGTGCGCCTCGAGGACCAGCTGGCCAT
CTCCGACTGGATTAACTCGAATCTGGGCCACGACAAGGATCTGCAACATC
TGCTGCCCATCGATAGCGAGGGCAAGCGCTTGTATCTGAGCATCAAGGAT
GGTATTCTGCTGTGCAAAATTATCAACCACTCCTGCCCGGACACAATCGA
TGAGCGTGCGATCAACAGCAAGAGCCTCACCGTCTAACGGGAGTTTGAGA
ACTTGACCCTGGCCTTGGTTTCCTCCCAAGCGATTGGATGCCACATCGTA
AACATCGATGCCCACGATCTGGCCAAGGGCAAGCCACGTCTGGTGCTGGG
TCTTCTCTGGCAGATCATCCGCATCGGTCTGTATAACCACATCACCCTGG
ACAGCTGTCCGGTATTGGCTGGCCTACTCTTCGACAACGAACGTCTCAAG
GATCTGATGAATATGTCGCCGGAGGCCATCCTTTTGTCTGGGTCACCATC
ATTTGGAACGAGCCGGCATCTCGAGGCGGTGCAACAATT
FMO06864.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:01:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Fim-RA | 3387 | CG8649-RA | 496..1376 | 9..887 | 3815 | 95.7 | Plus |
| Fim-RC | 3269 | CG8649-RC | 452..1258 | 83..887 | 3445 | 95.3 | Plus |
| Fim-RD | 3236 | CG8649-RD | 420..1225 | 84..887 | 3440 | 95.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:01:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 17288232..17289039 | 887..82 | 3400 | 95.3 | Minus |
| X | 23542271 | X | 17301360..17301434 | 83..9 | 375 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:01:24 has no hits.
FMO06864.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:59:26 Download gff for
FMO06864.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Fim-RA | 493..1378 | 2..889 | 95 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2010-07-30 09:21:20 Download gff for
FMO06864.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Fim-RA | 542..1427 | 2..889 | 95 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:35:56 Download gff for
FMO06864.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Fim-RA | 493..1378 | 2..889 | 95 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:35:56 Download gff for
FMO06864.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 17288229..17289037 | 84..889 | 95 | <- | Minus |
| X | 17301360..17301437 | 2..83 | 95 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:59:26 Download gff for
FMO06864.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 17182262..17183070 | 84..889 | 95 | <- | Minus |
| arm_X | 17195393..17195470 | 2..83 | 95 | | Minus |
