FMO06867.5prime Sequence
934 bp (934 high quality bases) assembled on 2008-10-01
> FMO06867.5prime
CAGTCGACATGAGCCTGAGGAAGTGGGGATACCGCCTGCTGCCGGGTCTA
AAGTGGCTGCACGGTTATACTGGCCAAGATGCAGTTGCGGATCTGATAGC
CGGAGTGACGGTCGGCCTGACGGTGTTGCCCCAAGGACTGGCCTACGCTA
CGCTGGCGGGACTGGAGCCCCAATATGGTCTGTACTCCGCCTTTGTGGGC
GGTATTATATACGCCATGCTGGGCAGCTGCCGGCAGGTGACCATTGGACC
CACGGCTTTGCTCGCACTGATGACAAGCCGGCACACGGGATTTGGACTGG
GATCGGGTCCAGCGTACGCGATACTTTTGTGCCTCATCTCTGGTGTTGTG
GAGCTGGGTATGGCAGTGCTGAAACTGGGTGCCCTGGTGGACCTGATATC
ACTGCCAGTTACCGTGGGATTCACCTCGGCCACCGCCGTCATCATTGGCA
CCTCGCAGCTAAAGGGTTTGCTGGGACTGCGTGGTGGATCCGGGTCTGAT
TTCATCAATACCATGCGCTCCGTGTTCGGAAATCTACACAAAGTTAGAAC
TGGTGATTTTACCCTTGGTTTGACTTCCATTATAGTTTTGCTACTTCTGC
GGAAACTAAAAGACGTTAAGCCTGGATGGTCGAATCCGGAACTTGCGAAA
CACAGCAGCTTGTAAGTGGTAGCATCTGGGTAATAGGCACCGGTCGGAAT
GCGCTGGGTCGTACTGGTGACCAGTGTGCTGGCCTACAGCACATGTGAGC
AGATGGAGAGCTGCCCGTTCATCCTTACTGGAAAAGGTCAAAAGCGGTCT
GCCAACGTTTCACTGCCAAAGTTTTGAGACCCCCATACTGGACAGGAATG
GCACCTGAGATCAGAACAGAAACTTTAACAGATGCTTCTCGGAACTGGGC
CCTTTCATGCTAATCCTACCCTTATAGCTGTGCC
FMO06867.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:17:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6928-RD | 2432 | CG6928-RD | 151..1070 | 8..933 | 4315 | 98.5 | Plus |
| CG6928-RC | 2445 | CG6928-RC | 164..1083 | 8..933 | 4315 | 98.5 | Plus |
| CG6928-RA | 2323 | CG6928-RA | 164..1083 | 8..933 | 4315 | 98.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:17:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 12005264..12005858 | 8..602 | 2975 | 100 | Plus |
| 3L | 28110227 | 3L | 12005916..12006174 | 602..865 | 960 | 97 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:17:27 has no hits.
FMO06867.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:42:59 Download gff for
FMO06867.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6928-RA | 157..1083 | 1..934 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-01 13:24:17 Download gff for
FMO06867.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6928-RA | 157..1083 | 1..934 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:00:52 Download gff for
FMO06867.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6928-RA | 157..1083 | 1..934 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:00:52 Download gff for
FMO06867.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 12005257..12005858 | 1..602 | 99 | -> | Plus |
| 3L | 12005917..12006192 | 603..884 | 96 | -> | Plus |
| 3L | 12006494..12006542 | 885..934 | 92 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:42:59 Download gff for
FMO06867.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 11999594..11999642 | 885..934 | 92 | | Plus |
| arm_3L | 11998357..11998958 | 1..602 | 99 | -> | Plus |
| arm_3L | 11999017..11999292 | 603..884 | 96 | -> | Plus |
