FMO06875.5prime Sequence
883 bp (883 high quality bases) assembled on 2008-10-01
> FMO06875.5prime
CAGTCGACATGTTAAGCAAAATGGCTAGCAACACAAGCGGCGGGGGAGGT
ACCACTTCAGGCACTGGAACGGGACGTCGTCTGCCACTCTCGCTGAGCGG
CGGTTCCACCGTCACGCGCTTGCAGCAATCTTCTGGCAGCAACGGCCGCT
CAAATAGCCCCCAAAATGGGAACAAAAAGATCACAGAGTCATTTTTGCCG
GTAAAAAAGAGCAACCAACCGCGGACCACTTCGACTGGATCCACCGGATC
CAGCCAGAACGGCGTAAGCAAGCCCACAAATGGCAAAGATAAGTCACAGA
ATGGCAGCTCAACAGGCAAAGACCAGAAGGTAGAGAAATCTAAAGATAAG
TTGCCGGAAAAGAAGGCAAAGGAAGTGGGTGCCGAGAATAAGGATAAGGA
TGGCGCTGCCGAGATGACAGATATGGAGGTTGTGGTCGAAAATAAGCAAA
AGGAGGTGGTATCCGAAAATAAGCAAAATGAGGTGGTATCTGAAAATAAG
GAAGTGGTATCTGAAAATAAGGAGGTGGTATCCGAAAATAAGGAGGTGGC
TTCCGAAAAAAAGGTGGTGGTAGCTGAAGTTCCCTCCGACAAAGACGACA
ACGGAGAGACCAAAAAAGATGATGCTACCGTTGAGAGTACTGCTCCTGCT
TCTCAACGCCTGCGGATGCTGCGGGTAATCATCGATGAAGTAGTGTTTAT
TCCCGATCTCAGCACTCCTACTAAGATCGCAAGTCTACACGCAAGTCGGG
TAGCCAGCAAAGTCACCCATCAGCAAGGCAAGCAACGCTTCGCCTGTCCA
GAAGATAAAAACCGAAGCAGTATTCTTCATCGACATCGGGCTCTTTGACT
CCACTAGAAGATGTCGATATGGAACCGCTACAA
FMO06875.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:09:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| kuk-RC | 2200 | CG5175-RC | 116..991 | 9..883 | 4250 | 99.3 | Plus |
| kuk-RB | 2238 | CG5175-RB | 154..1029 | 9..883 | 4250 | 99.3 | Plus |
| kuk-RA | 2231 | CG5175-RA | 147..1022 | 9..883 | 4250 | 99.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:09:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 17082697..17083572 | 9..883 | 4125 | 99.3 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:09:09 has no hits.
FMO06875.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:24:59 Download gff for
FMO06875.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| kuk-RA | 141..1020 | 1..881 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-01 13:23:53 Download gff for
FMO06875.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| kuk-RB | 146..1025 | 1..881 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:01:03 Download gff for
FMO06875.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| kuk-RA | 141..1020 | 1..881 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:01:03 Download gff for
FMO06875.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 17082691..17083570 | 1..881 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:24:59 Download gff for
FMO06875.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 12908413..12909292 | 1..881 | 98 | | Plus |
