FMO06881.5prime Sequence
919 bp (919 high quality bases) assembled on 2008-10-01
> FMO06881.5prime
GCGGCCGCGACGTCCACATATACCTGCCGTTCACTATTATTTAGTGAAAT
GAGATATTATGATATTTTCTGAATTGTGATTAAAAAGGCAACTTTATGCC
CATGCAACAGAAACTATAAAAAATACAGAGAATGAAAAGAAACAGATAGA
TTTTTTAGTTCTTTAGGCCCGTAGTCTGCAAATCCTTTTATGATTTTCTA
TCAAACAAAAGAGGAAAATAGACCAGTTGCAATCCAAACGAGAGTCTAAT
AGAATGAGGTCGAAAAGTAAATCGCGCGGGTTTGTTACTGATAAAGCAGG
CAAGACCTAAAATGTGTAAAGGGCAAAGTGTATACTTTGGCGTCACCCCT
TACATATTTTAGGTCTTTTTTTATTGTGCGTAACTAACTTGCCATCTTCA
AACAGGAGGGCTGGAAGAAGCAGACCGCTAACACAGTACATAAAAAAGGA
GACATGAACGATGAACATCAAAAAGTTTGCAAAACAAGCAACAGTATTAA
CCTTTACTACCGCACTGCTGGCAGGAGGCGCAACTCAAGCGTTTGCGAAA
GAAACGAACCAAAAGCCATATAAGGAAACATACGGCATTTCCCATATTAC
ACGCCATGATATGCTGCAAATCCCTGAACAGCAAAAAAATGAAAAATATA
AAGTTCCTGAGTTCGATTCGTCCACAATTAAAAATATCTCTTCTGCAAAA
GGCCGGCAAGAATCTGGAGCAGCTTGACCTCATGGGCATTCTGAACATAA
CGCATGAGCGTGTTTATGACATTCTGGTCAACTGTCCCAAGCTGCAGTTG
CTGGACTTGAGTTTCTGTGACAACATCATGGATCGGGATTTCGATTTGCT
GGCGGAATGGTCGCGACAATTTAAAGTGGACATCAGAGCAGTCGACGTCC
GCAAGCTTTTCTAGACCAT
FMO06881.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:37:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Fbxl4-RA | 2894 | CG1839-RA | 2410..2605 | 705..899 | 955 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:37:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 14234825..14234894 | 839..770 | 350 | 100 | Minus |
| X | 23542271 | X | 14234959..14235023 | 769..705 | 325 | 100 | Minus |
| X | 23542271 | X | 14234702..14234762 | 899..840 | 255 | 98.4 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:37:20 has no hits.
FMO06881.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:33:33 Download gff for
FMO06881.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Fbxl4-RA | 2410..2605 | 705..899 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-01 13:23:40 Download gff for
FMO06881.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Fbxl4-RA | 2410..2605 | 705..899 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:35:52 Download gff for
FMO06881.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Fbxl4-RA | 2410..2605 | 705..899 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:35:52 Download gff for
FMO06881.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 14234702..14234762 | 840..899 | 98 | <- | Minus |
| X | 14234825..14234894 | 770..839 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:33:33 Download gff for
FMO06881.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 14128735..14128795 | 840..899 | 98 | <- | Minus |
| arm_X | 14128858..14128927 | 770..839 | 100 | <- | Minus |
