FMO06884.5prime Sequence
653 bp (630 high quality bases) assembled on 2008-10-01
> FMO06884.5prime
ACGCCCACACCCGGGTCGACTTCCTCCAACAACAGTGCCACGCTCGACGC
GCTGCACCAGCAACAACAGCAGCAGCACCAGCAGCATCAGCTGCAGCAAC
AACTGCAGCAGTTGCACACGAACGCCGCAAACAATTCACGGCCCCCCTCA
CGTGCCCCCTCCATTCTGGACAGTCCGACCCTGGCGCGTGTGGAGCGGGC
TCGTCTGCGACTGGAGCAGCAGGAGCGGGAGCGGGAACGGGAGCGTAGCA
GCCAGCGGGAGGTGGGCGGCGGCAGCGGAGGAGGCGGCGGCGGTGGTAGC
AGCACTGGCACTGGCAGCACCGCCACAACCATGAATCGTGAGTATAGCCT
GGAGCGCAGTATTTTGGATCCCAAGCAATCCTTGCTGGCAGGACGCATTC
CGGTGGCCTCCATGACAGGACCCATTAAACGCGGACTGCTCTGGCAGCAA
AGGGATCGGCTCTTCTCTCGCTGGAAGGAGCGATACTTTGTGCTCACTCG
TGACTACTTGCACTGCTTCAAAAGAGCCTCGGGATCGGCCAATGAACGTG
CCTCGGATATGGGACAGTTTATCTTCAAGGTCAAGCTGGTGGACGTGGAG
AGGTGGAGTGGCTGATTCGGCGCTCCTACAGCGCCATTGGTCTGCTACTG
GGC
FMO06884.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:16:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32982-RG | 2766 | CG32982-RG | 416..1068 | 1..652 | 3210 | 99.5 | Plus |
| CG32982-RA | 2761 | CG32982-RA | 416..1068 | 1..652 | 3210 | 99.5 | Plus |
| CG32982-RH | 2682 | CG32982-RH | 416..995 | 1..580 | 2885 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:16:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 9127092..9127466 | 1..375 | 1860 | 99.7 | Plus |
| 2L | 23513712 | 2L | 9154657..9154765 | 374..482 | 545 | 100 | Plus |
| 2L | 23513712 | 2L | 9156497..9156596 | 482..581 | 500 | 100 | Plus |
| 2L | 23513712 | 2L | 9161129..9161204 | 578..652 | 315 | 97.4 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:16:03 has no hits.
FMO06884.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:59:26 Download gff for
FMO06884.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32982-RA | 416..1068 | 1..653 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2010-07-30 09:21:19 Download gff for
FMO06884.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32982-RA | 402..1054 | 1..653 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:09:40 Download gff for
FMO06884.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32982-RA | 416..1068 | 1..653 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:09:40 Download gff for
FMO06884.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 9127092..9127466 | 1..375 | 99 | -> | Plus |
| 2L | 9154659..9154765 | 376..482 | 100 | -> | Plus |
| 2L | 9156498..9156594 | 483..579 | 100 | -> | Plus |
| 2L | 9161131..9161204 | 580..653 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:59:26 Download gff for
FMO06884.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 9127092..9127466 | 1..375 | 99 | -> | Plus |
| arm_2L | 9154659..9154765 | 376..482 | 100 | -> | Plus |
| arm_2L | 9156498..9156594 | 483..579 | 100 | -> | Plus |
| arm_2L | 9161131..9161204 | 580..653 | 96 | | Plus |
